Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 6.9e-202 707.2 391 100.0
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 3.9e-96 355.9 399 60.9
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 3.5e-68 263.1 389 50.6
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 5.2e-56 222.6 260 49.6
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 8.3e-54 215.3 152 70.4
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.8e-53 214.2 197 58.4
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 1.8e-53 214.2 152 69.1
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.8e-53 214.2 153 69.3
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 4.1e-53 213.0 175 62.9
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 9.2e-53 211.8 251 49.8
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 1.2e-52 211.5 152 67.8
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.0e-52 210.7 199 57.3
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 3.5e-52 209.9 182 60.4
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 7.7e-52 208.8 152 68.4
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 7.7e-52 208.8 198 56.6
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 7.7e-52 208.8 257 50.2
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.0e-51 208.4 257 48.2
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.3e-51 208.0 264 48.9
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 1.3e-51 208.0 151 68.9
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.3e-51 208.0 268 50.4
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 1.7e-51 207.6 336 41.4
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 6.6e-51 205.7 153 66.7
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 8.6e-51 205.3 397 39.0
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.1e-50 204.9 151 68.2
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 1.1e-50 204.9 152 66.4
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 1.9e-50 204.1 152 66.4
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 2.5e-50 203.8 152 65.8
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 3.3e-50 203.4 345 42.6
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 5.6e-50 202.6 353 41.4
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 7.3e-50 202.2 256 47.7
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 9.5e-50 201.8 151 66.9
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 9.5e-50 201.8 152 65.1
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.6e-49 201.1 152 66.4
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 2.1e-49 200.7 153 66.7
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.1e-49 200.7 327 41.9
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 2.8e-49 200.3 337 45.7
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 4.7e-49 199.5 182 57.7
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 6.1e-49 199.1 152 65.8
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 8.0e-49 198.7 331 42.6
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 1.0e-48 198.4 185 58.9
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.4e-48 198.0 152 65.8
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.8e-48 197.6 152 65.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 1.8e-48 197.6 145 67.6
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 1.8e-48 197.6 188 58.5
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.3e-48 197.2 144 69.4
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 4.0e-48 196.4 174 60.3
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 8.9e-48 195.3 391 37.3
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 2.6e-47 193.7 254 46.5
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 7.5e-47 192.2 152 64.5
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 1.3e-46 191.4 347 40.3
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 1.3e-46 191.4 150 62.0
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.7e-46 191.0 134 69.4
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.7e-46 191.0 263 47.5
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.7e-46 191.0 185 54.1
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 2.9e-46 190.3 269 45.4
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 6.4e-46 189.1 186 52.2
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 6.4e-46 189.1 150 62.7
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 6.4e-46 189.1 169 60.4
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 8.3e-46 188.7 171 59.1
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 1.4e-45 188.0 150 62.0
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.8e-45 187.6 153 61.4
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.8e-45 187.6 298 45.3
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.1e-45 186.4 262 48.1
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.1e-45 186.4 262 48.1
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 5.4e-45 186.0 285 45.3
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 7.0e-45 185.7 277 42.6
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 7.0e-45 185.7 382 41.1
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 1.2e-44 184.9 191 55.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.6e-44 184.5 306 41.2
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 1.6e-44 184.5 277 43.7
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.0e-44 184.1 158 61.4
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 2.7e-44 183.7 134 67.9
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.5e-44 183.3 151 60.3
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 4.6e-44 183.0 131 68.7
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 4.6e-44 183.0 152 61.8
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 1.3e-43 181.4 262 43.9
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-43 181.0 140 67.1
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 2.3e-43 180.6 150 60.0
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 3.9e-43 179.9 323 36.8
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 6.6e-43 179.1 328 38.4
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 8.6e-43 178.7 359 35.7
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 8.6e-43 178.7 139 64.0
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.1e-42 178.3 315 41.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.5e-42 177.2 311 39.5
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 2.5e-42 177.2 376 40.2
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 2.5e-42 177.2 369 38.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 3.3e-42 176.8 132 64.4
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 5.6e-42 176.0 151 58.9
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.6e-41 174.5 161 59.6
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.4e-40 171.4 193 51.8
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 1.4e-40 171.4 193 51.8
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.4e-40 171.4 323 38.1
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 1.4e-40 171.4 151 57.6
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.5e-39 167.9 172 53.5
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 2.0e-39 167.5 390 34.9
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.6e-39 167.2 244 44.3
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 7.5e-39 165.6 280 41.1
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.7e-38 164.5 327 36.1
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.7e-38 164.5 328 36.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.7e-38 164.5 327 36.1
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 2.2e-38 164.1 315 41.0
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 3.7e-38 163.3 387 35.9
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.7e-38 163.3 142 59.9
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.7e-38 163.3 387 35.9
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 8.3e-38 162.2 123 63.4
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.4e-37 161.4 170 52.4
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.4e-37 161.4 135 61.5
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.4e-37 161.4 153 56.9
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.0e-37 159.1 278 38.8
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.6e-36 157.9 155 53.5
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.6e-36 157.9 155 53.5
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 2.0e-36 157.5 392 38.3
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.9e-34 151.0 131 58.0
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 1.9e-34 151.0 139 55.4
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 2.5e-34 150.6 322 37.6
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.3e-34 150.2 156 50.6
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 9.5e-34 148.7 134 55.2
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.1e-33 147.5 152 52.0
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 8.9e-32 142.1 131 58.8
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 8.9e-32 142.1 136 55.1
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.2e-31 141.7 157 48.4
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.5e-31 141.4 404 32.4
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 2.0e-31 141.0 388 34.0
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 6.4e-30 136.0 123 58.5
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 3.5e-28 130.2 104 60.6
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 6.0e-28 129.4 140 48.6
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 8.6e-27 125.6 102 66.7
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 3.3e-26 123.6 372 32.0
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 5.6e-26 122.9 132 46.2
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.8e-24 117.9 144 47.2
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.3e-22 111.7 153 43.1
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-21 108.6 116 47.4
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 1.6e-20 104.8 235 34.5
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 4.7e-17 93.2 141 39.7
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 5.2e-16 89.7 133 38.3
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 6.9e-16 89.4 89 48.3
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 2.0e-15 87.8 106 44.3
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 1.4e-13 81.6 100 52.0
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 7.1e-13 79.3 109 38.5
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 1.3e-11 75.1 84 51.2
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 5.6e-10 69.7 52 55.8
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 3.6e-09 67.0 168 28.6
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 4.8e-09 66.6 147 29.9


User provided reference genes

Program Settings