Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3602 Erigeron canadensis HOM05D004242 ORTHO05D004349 3.4e-119 431.8 238 100.0
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 7.6e-18 95.1 177 44.1
Lsat_1_v5_gn_3_140940 Lactuca sativa HOM05D004242 ORTHO05D004349 4.2e-16 89.4 179 43.0
Lj9P602T20 Lonicera japonica HOM05D004242 ORTHO05D004349 1.5e-13 80.9 205 34.1
Sed0017381 Sechium edule HOM05D004242 ORTHO05D004349 3.1e-11 73.2 252 33.7
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.2e-10 71.2 196 33.2
TWI14G0118 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 7.6e-10 68.6 138 38.4
CSS0040523 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 1.7e-09 67.4 180 35.0
Gohir.D11G103800 Gossypium hirsutum HOM05D004242 ORTHO05D004349 1.7e-09 67.4 115 42.6
Gorai.007G111100 Gossypium raimondii HOM05D004242 ORTHO05D004349 1.7e-09 67.4 115 42.6
Manes.05G019100 Manihot esculenta HOM05D004242 ORTHO05D004349 1.7e-09 67.4 316 32.0
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 1.7e-09 67.4 104 42.3
Potri.002G175400 Populus trichocarpa HOM05D004242 ORTHO05D004349 2.9e-09 66.6 133 36.8
Duzib138G0794 Durio zibethinus HOM05D004242 ORTHO05D004349 3.8e-09 66.2 116 44.0
QL08p046281 Quercus lobata HOM05D004242 ORTHO05D004349 4.9e-09 65.9 137 38.0
Hma1.2p1_0309F.1_g120440 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 1.1e-08 64.7 200 34.0
Manes.01G267100 Manihot esculenta HOM05D004242 ORTHO05D004349 1.1e-08 64.7 148 34.5
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 1.1e-08 64.7 249 29.3
Thhalv10006210m.g Eutrema salsugineum HOM05D004242 ORTHO05D004349 1.4e-08 64.3 253 31.2
Nitab4.5_0000508g0190 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.9e-08 63.9 252 30.2
Nitab4.5_0005697g0010 Nicotiana tabacum HOM05D004242 ORTHO05D004349 1.9e-08 63.9 260 31.9
EL10Ac1g00218 Beta vulgaris HOM05D004242 ORTHO05D004349 2.5e-08 63.5 125 40.8
Eucgr.D02643 Eucalyptus grandis HOM05D004242 ORTHO05D004349 3.2e-08 63.2 115 38.3
Haze_15699 Corylus avellana HOM05D004242 ORTHO05D004349 4.2e-08 62.8 109 39.4
Gohir.A11G099300 Gossypium hirsutum HOM05D004242 ORTHO05D004349 5.5e-08 62.4 195 33.3
DCAR_002987 Daucus carota HOM05D004242 ORTHO05D004349 7.1e-08 62.0 217 29.0
Potri.014G102466 Populus trichocarpa HOM05D004242 ORTHO05D004349 7.1e-08 62.0 122 40.2
Aa31LG1G28030 Aethionema arabicum HOM05D004242 ORTHO05D004349 1.2e-07 61.2 226 28.8
CAN.G211.7 Capsicum annuum HOM05D004242 ORTHO05D004349 1.2e-07 61.2 269 29.0
Sp5g01480 Schrenkiella parvula HOM05D004242 ORTHO05D004349 1.2e-07 61.2 250 30.8
TAR339G0002 Trochodendron aralioides HOM05D004242 ORTHO05D004349 1.6e-07 60.8 266 30.1
Atru.chr5.733 Acer truncatum HOM05D004242 ORTHO05D004349 2.1e-07 60.5 125 36.8
Lj8P558T18 Lonicera japonica HOM05D012621 ORTHO05D004349 2.1e-07 60.5 80 43.8
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 2.7e-07 60.1 189 31.7
AUR62004535 Chenopodium quinoa HOM05D004242 ORTHO05D004349 3.5e-07 59.7 105 42.9
Sed0006480 Sechium edule HOM05D004242 ORTHO05D004349 3.5e-07 59.7 258 27.1
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 3.5e-07 59.7 224 29.9
VMungo0540G1056 Vigna mungo HOM05D004242 ORTHO05D004349 3.5e-07 59.7 319 29.2
Actinidia25370 Actinidia chinensis HOM05D004242 ORTHO05D004349 4.6e-07 59.3 291 32.0
CSS0005133 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 4.6e-07 59.3 265 29.1
CSS0009998 Camellia sinensis var. sinensis HOM05D004242 ORTHO05D004349 4.6e-07 59.3 265 29.1
Dinv32623 Davidia involucrata HOM05D004242 ORTHO05D004349 4.6e-07 59.3 118 39.8
Lj1g0015234 Lotus japonicus HOM05D004242 ORTHO05D004349 4.6e-07 59.3 225 28.0
TWI59G0661 Tripterygium wilfordii HOM05D004242 ORTHO05D004349 4.6e-07 59.3 148 35.1
Ca_09531_v3 Cicer arietinum L. HOM05D004242 ORTHO05D004349 6.0e-07 58.9 223 28.3
ClCG06G002780 Citrullus lanatus HOM05D004242 ORTHO05D004349 6.0e-07 58.9 349 26.9
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 6.0e-07 58.9 109 35.8
Dinv18906 Davidia involucrata HOM05D004242 ORTHO05D004349 7.9e-07 58.5 81 46.9
Lj8A559T40 Lonicera japonica HOM05D012621 ORTHO05D004349 7.9e-07 58.5 98 42.9
Lalb_Chr15g0076401 Lupinus albus HOM05D004242 ORTHO05D004349 1.8e-06 57.4 152 34.9
Peaxi162Scf00014g00294 Petunia axillaris HOM05D004242 ORTHO05D004349 1.8e-06 57.4 266 29.3
AUR62022719 Chenopodium quinoa HOM05D004242 ORTHO05D004349 3.0e-06 56.6 105 41.0
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 3.0e-06 56.6 143 33.6
Phvul.006G115800 Phaseolus vulgaris HOM05D004242 ORTHO05D004349 3.0e-06 56.6 326 29.1
AT2G46630 Arabidopsis thaliana HOM05D004242 ORTHO05D004349 3.9e-06 56.2 119 37.0
Lj8P558T21 Lonicera japonica HOM05D012621 ORTHO05D004349 3.9e-06 56.2 209 29.2
PGSC0003DMG400007374 Solanum tuberosum HOM05D004242 ORTHO05D004349 3.9e-06 56.2 41 68.3
CARHR141970 Cardamine hirsuta HOM05D004242 ORTHO05D004349 5.1e-06 55.8 117 36.8
Lj9C255T10 Lonicera japonica HOM05D012621 ORTHO05D004349 5.1e-06 55.8 126 34.1
Rhsim07G0001600 Rhododendron simsii HOM05D004242 ORTHO05D004349 5.1e-06 55.8 208 30.8
GSVIVG01027401001 Vitis vinifera HOM05D004242 ORTHO05D004349 6.7e-06 55.5 236 30.1
BcaC07g42602 Brassica carinata HOM05D004242 ORTHO05D004349 8.7e-06 55.1 95 47.4
FvH4_4g01200 Fragaria vesca HOM05D004242 ORTHO05D004349 8.7e-06 55.1 36 66.7
FAN12G0333 Fragaria x ananassa HOM05D004242 ORTHO05D004349 8.7e-06 55.1 36 66.7
Gohir.D07G140400 Gossypium hirsutum HOM05D004242 ORTHO05D004349 8.7e-06 55.1 92 39.1
Lalb_Chr10g0100731 Lupinus albus HOM05D004242 ORTHO05D004349 8.7e-06 55.1 237 27.8
THA.LOC104817612 Tarenaya hassleriana HOM05D004242 ORTHO05D004349 8.7e-06 55.1 226 34.1


User provided reference genes

Program Settings