Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3258 Erigeron canadensis HOM05D007942 ORTHO05D010045 3.1e-43 177.9 84 100.0
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 2.5e-32 141.7 84 79.8
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 4.7e-31 137.5 84 76.2
Lsat_1_v5_gn_6_85200 Lactuca sativa HOM05D007942 ORTHO05D010045 4.0e-22 107.8 60 83.3
Dinv37608 Davidia involucrata HOM05D007942 ORTHO05D010045 1.2e-15 86.3 81 53.1
Manes.02G018400 Manihot esculenta HOM05D007942 ORTHO05D010045 1.1e-14 83.2 84 51.2
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 6.8e-14 80.5 85 48.2
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 1.2e-13 79.7 85 47.1
Potri.003G131550 Populus trichocarpa HOM05D007942 ORTHO05D010045 1.2e-13 79.7 84 50.0
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 3.4e-13 78.2 71 56.3
TWI81G0525 Tripterygium wilfordii HOM05D007942 ORTHO05D010045 3.4e-13 78.2 85 44.7
vmacro13966 Vaccinium macrocarpon HOM05D007942 ORTHO05D010045 7.6e-13 77.0 85 48.2
Thecc.03G284800 Theobroma cacao HOM05D007942 ORTHO05D010045 1.7e-12 75.9 83 50.6
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 6.4e-12 73.9 83 49.4
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 6.4e-12 73.9 84 47.6
RcHm_v2.0_Chr7g0196851 Rosa chinensis HOM05D007942 ORTHO05D010045 6.4e-12 73.9 86 45.3
Cpa.g.sc180.26 Carica papaya HOM05D007942 ORTHO05D010045 1.1e-11 73.2 83 45.8
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 1.1e-11 73.2 71 52.1
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 1.9e-11 72.4 84 46.4
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 2.4e-11 72.0 70 50.0
Prupe.5G105000 Prunus persica HOM05D007942 ORTHO05D010045 3.2e-11 71.6 89 47.2
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 4.1e-11 71.2 87 43.7
MELO3C005703.2 Cucumis melo HOM05D007942 ORTHO05D010045 5.4e-11 70.9 86 47.7
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 7.1e-11 70.5 88 40.9
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 7.1e-11 70.5 69 52.2
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 9.2e-11 70.1 71 50.7
Lalb_Chr05g0211711 Lupinus albus HOM05D007942 ORTHO05D010045 1.6e-10 69.3 79 49.4
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 1.6e-10 69.3 81 48.1
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 1.6e-10 69.3 83 41.0
ClCG01G002420 Citrullus lanatus HOM05D007942 ORTHO05D010045 2.1e-10 68.9 86 44.2
QL12p032065 Quercus lobata HOM05D007942 ORTHO05D010045 7.8e-10 67.0 73 49.3
Haze_08827 Corylus avellana HOM05D007942 ORTHO05D010045 1.0e-09 66.6 85 42.4
Atru.chr9.2136 Acer truncatum HOM05D007942 ORTHO05D010045 1.3e-09 66.2 81 44.4
CsaV3_5G002530 Cucumis sativus L. HOM05D007942 ORTHO05D010045 1.3e-09 66.2 83 45.8
Eucgr.E00650 Eucalyptus grandis HOM05D007942 ORTHO05D010045 1.7e-09 65.9 74 43.2
CAN.G532.20 Capsicum annuum HOM05D007942 ORTHO05D010045 3.0e-09 65.1 59 55.9
FvH4_5g03010 Fragaria vesca HOM05D007942 ORTHO05D010045 3.0e-09 65.1 86 43.0
FAN18G2800 Fragaria x ananassa HOM05D007942 ORTHO05D010045 3.0e-09 65.1 86 43.0
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 6.6e-09 63.9 74 44.6
EL10Ac5g12820 Beta vulgaris HOM05D007942 ORTHO05D010045 8.7e-09 63.5 89 42.7
Migut.E01201 Erythranthe guttata HOM05D007942 ORTHO05D010045 8.7e-09 63.5 81 42.0
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 1.1e-08 63.2 61 44.3
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 1.5e-08 62.8 61 45.9
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 1.5e-08 62.8 61 45.9
Medtr5g010040 Medicago truncatula HOM05D007942 ORTHO05D010045 1.5e-08 62.8 88 44.3
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 1.5e-08 62.8 59 49.2
TPR.G6630 Trifolium pratense HOM05D007942 ORTHO05D010045 1.5e-08 62.8 80 46.2
Ah.07g196590 Amaranthus hybridus HOM05D007942 ORTHO05D010045 1.9e-08 62.4 78 41.0
Ca_24542_v3 Cicer arietinum L. HOM05D007942 ORTHO05D010045 1.9e-08 62.4 81 44.4
A08p16150 Brassica napus HOM05D007942 ORTHO05D010045 3.3e-08 61.6 86 39.5
C03p84680 Brassica napus HOM05D007942 ORTHO05D010045 3.3e-08 61.6 86 39.5
BolC3t20755H Brassica oleracea HOM05D007942 ORTHO05D010045 3.3e-08 61.6 86 39.5
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 3.3e-08 61.6 86 43.0
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 3.3e-08 61.6 61 49.2
Carub.0007s1768 Capsella rubella HOM05D007942 ORTHO05D010045 4.3e-08 61.2 72 41.7
SalBow8G0610 Salvia bowleyana HOM05D007942 ORTHO05D010045 4.3e-08 61.2 78 44.9
CARHR230820 Cardamine hirsuta HOM05D007942 ORTHO05D010045 5.6e-08 60.8 77 37.7
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 7.3e-08 60.5 59 50.8
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 7.3e-08 60.5 59 50.8
BcaB03g11761 Brassica carinata HOM05D007942 ORTHO05D010045 9.6e-08 60.1 61 44.3
BcaB03g11762 Brassica carinata HOM05D007942 ORTHO05D010045 9.6e-08 60.1 61 44.3
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 1.6e-07 59.3 61 44.3
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 1.6e-07 59.3 61 44.3
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 1.6e-07 59.3 61 44.3
Duzib205G1349 Durio zibethinus HOM05D007942 ORTHO05D010045 1.6e-07 59.3 57 50.9
Thhalv10026690m.g Eutrema salsugineum HOM05D007942 ORTHO05D010045 2.1e-07 58.9 72 37.5
BcaC01g00815 Brassica carinata HOM05D007942 ORTHO05D010045 6.2e-07 57.4 61 44.3
AL7G29970 Arabidopsis lyrata HOM05D007942 ORTHO05D010045 1.1e-06 56.6 61 39.3
FAN08G2317 Fragaria x ananassa HOM05D007942 ORTHO05D010045 4.0e-06 54.7 77 42.9
MBI04_g39575_MAGBIO Magnolia biondii HOM05D007942 ORTHO05D010045 6.9e-06 53.9 82 41.5
LjContig00312_ERROPOS870357g0005136 Lotus japonicus HOM05D007942 ORTHO05D010045 9.0e-06 53.5 37 56.8


User provided reference genes

Program Settings