Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 8.9e-40 166.4 79 100.0
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 4.4e-31 137.5 80 82.5
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 1.2e-28 129.4 80 77.5
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 9.6e-26 119.8 80 70.0
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.2e-25 119.4 79 69.6
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.6e-25 117.9 80 70.0
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 6.0e-20 100.5 75 60.0
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 5.1e-19 97.4 79 58.2
ECA240G0866 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.6e-17 92.4 80 57.5
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 3.8e-14 81.3 75 44.0
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 2.4e-13 78.6 84 54.8
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 6.0e-12 73.9 82 50.0
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 7.9e-12 73.6 72 55.6
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 7.9e-12 73.6 72 55.6
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.0e-11 73.2 75 44.0
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 1.3e-11 72.8 75 52.0
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 1.8e-11 72.4 83 49.4
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 3.0e-11 71.6 76 50.0
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 3.9e-11 71.2 83 49.4
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.9e-10 68.9 76 53.9
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.9e-10 68.9 76 53.9
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.9e-10 68.9 76 53.9
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.9e-10 68.9 76 50.0
ECA236G2737 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.3e-10 68.2 71 43.7
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.3e-10 67.8 74 52.7
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 7.4e-10 67.0 81 45.7
Lsat_1_v5_gn_9_84961 Lactuca sativa HOM05D002165 ORTHO05D001531 7.4e-10 67.0 74 41.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 9.6e-10 66.6 67 50.7
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.6e-09 65.9 77 49.4
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.6e-09 65.9 76 50.0
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 4.8e-09 64.3 69 55.1
Lsat_1_v5_gn_9_85080 Lactuca sativa HOM05D002165 ORTHO05D001531 6.2e-09 63.9 67 49.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.1e-08 63.2 69 53.6
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.1e-08 63.2 69 53.6
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.1e-08 61.6 69 53.6
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.1e-08 61.6 69 53.6
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 3.1e-08 61.6 80 45.0
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.0e-08 61.2 64 46.9
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 4.0e-08 61.2 82 45.1
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 4.0e-08 61.2 78 43.6
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.3e-08 60.8 86 46.5
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 5.3e-08 60.8 86 46.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 5.3e-08 60.8 67 47.8
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 6.9e-08 60.5 81 44.4
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 6.9e-08 60.5 66 45.5
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.0e-08 60.1 66 48.5
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-07 59.3 66 48.5
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.5e-07 59.3 66 51.5
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.0e-07 58.9 65 46.2
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 2.0e-07 58.9 81 43.2
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 2.0e-07 58.9 65 47.7
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 2.0e-07 58.9 69 50.7
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.6e-07 58.5 67 50.7
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 3.4e-07 58.2 81 42.0
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.4e-07 58.2 67 50.7
QL03p011084 Quercus lobata HOM05D016210 ORTHO05D001531 3.4e-07 58.2 78 43.6
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.4e-07 58.2 67 49.3
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 4.5e-07 57.8 65 47.7
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 4.5e-07 57.8 65 47.7
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 4.5e-07 57.8 65 47.7
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 4.5e-07 57.8 56 57.1
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 4.5e-07 57.8 68 51.5
Sp3g04720 Schrenkiella parvula HOM05D002165 ORTHO05D001531 4.5e-07 57.8 65 47.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 5.8e-07 57.4 65 49.2
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.8e-07 57.4 67 49.3
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 5.8e-07 57.4 71 47.9
A01p30200 Brassica napus HOM05D002165 ORTHO05D001531 7.6e-07 57.0 65 47.7
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 70 41.4
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 67 49.3
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 67 49.3
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 9.9e-07 56.6 68 45.6
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.9e-07 56.6 74 44.6
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-06 56.2 65 46.2
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 1.3e-06 56.2 65 46.2
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 1.3e-06 56.2 65 46.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 1.3e-06 56.2 67 44.8
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.3e-06 56.2 76 44.7
BcaC09g47857 Brassica carinata HOM05D002165 ORTHO05D001531 2.9e-06 55.1 65 47.7
BolC1t05659H Brassica oleracea HOM05D002165 ORTHO05D001531 2.9e-06 55.1 65 47.7
BraA01t04469Z Brassica rapa HOM05D002165 ORTHO05D001531 2.9e-06 55.1 65 47.7
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.1 75 42.7
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.1 75 42.7
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.1 75 42.7
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 2.9e-06 55.1 68 44.1
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.8e-06 54.7 66 51.5
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 3.8e-06 54.7 50 62.0
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 4.9e-06 54.3 61 45.9
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 6.4e-06 53.9 65 44.6
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.4e-06 53.9 66 48.5
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.4e-06 53.9 67 47.8
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.4e-06 53.9 66 50.0
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 8.4e-06 53.5 58 55.2
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 8.4e-06 53.5 69 46.4
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 8.4e-06 53.5 69 50.7


User provided reference genes

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