Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 6.2e-186 654.1 347 100.0
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 9.0e-145 517.3 322 84.8
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.7e-143 513.1 326 83.1
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 9.1e-121 437.6 278 77.0
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 9.1e-121 437.6 305 70.8
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 3.8e-119 432.2 294 72.8
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.1e-118 430.6 280 75.7
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 3.2e-118 429.1 277 78.3
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 1.2e-117 427.2 287 73.5
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 3.6e-117 425.6 293 71.0
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 4.7e-117 425.2 304 71.1
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 6.1e-117 424.9 293 71.0
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 8.0e-117 424.5 282 75.5
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 1.4e-116 423.7 271 74.2
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 3.0e-116 422.5 293 70.6
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.0e-116 422.2 277 74.0
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 6.8e-116 421.4 280 71.4
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 6.8e-116 421.4 278 74.5
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 6.8e-116 421.4 290 70.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 1.5e-115 420.2 294 70.7
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.0e-115 419.9 280 71.8
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 2.6e-115 419.5 287 72.1
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 7.5e-115 417.9 292 70.5
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 9.7e-115 417.5 287 71.8
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 1.7e-114 416.8 269 74.3
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 4.8e-114 415.2 309 66.0
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 4.8e-114 415.2 292 69.5
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 6.3e-114 414.8 280 71.4
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 6.3e-114 414.8 277 73.3
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-113 414.1 270 73.3
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.4e-113 413.7 279 71.3
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.4e-113 413.7 287 70.7
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.8e-113 413.3 279 71.3
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.8e-113 413.3 276 73.2
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 5.3e-113 411.8 298 67.8
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 7.0e-113 411.4 279 70.6
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.7e-112 409.5 286 72.4
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.7e-112 409.5 282 70.9
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 2.7e-112 409.5 276 73.2
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.5e-112 409.1 278 73.0
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 7.7e-112 407.9 287 70.0
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 7.7e-112 407.9 282 69.5
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.0e-111 407.5 320 67.2
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.7e-111 406.8 276 72.5
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 2.2e-111 406.4 279 70.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.2e-111 406.4 311 65.0
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 2.9e-111 406.0 280 71.1
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.8e-111 405.6 277 71.1
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 3.8e-111 405.6 282 70.6
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.0e-111 405.2 280 71.1
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.5e-110 403.7 277 70.0
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.5e-110 403.7 292 70.2
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.5e-110 403.7 281 71.5
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.5e-110 402.9 292 68.8
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 4.2e-110 402.1 276 69.9
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 4.2e-110 402.1 270 70.7
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 5.5e-110 401.7 281 69.8
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 5.5e-110 401.7 285 67.0
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 7.2e-110 401.4 256 76.6
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 7.2e-110 401.4 282 69.5
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.2e-109 400.6 244 78.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.2e-109 400.6 271 71.6
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 1.2e-109 400.6 313 66.1
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 3.6e-109 399.1 285 68.8
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 4.7e-109 398.7 244 77.9
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 4.7e-109 398.7 279 68.8
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 6.1e-109 398.3 260 75.0
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 6.1e-109 398.3 271 70.5
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 5.2e-108 395.2 290 67.2
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.6e-107 392.9 263 74.5
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 4.4e-107 392.1 280 68.6
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 5.7e-107 391.7 276 67.8
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 2.4e-105 386.3 321 62.3
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 3.1e-105 386.0 237 77.6
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 5.0e-103 378.6 297 62.6
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 9.5e-102 374.4 299 64.5
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.4e-100 370.5 287 66.6
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.3e-100 369.8 234 75.2
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 2.3e-100 369.8 270 66.7
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 6.8e-100 368.2 287 66.6
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 2.0e-99 366.7 273 65.9
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.6e-99 366.3 237 74.3
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 4.4e-99 365.5 270 67.0
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.4e-99 365.5 236 73.3
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 8.3e-98 361.3 285 65.6
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 1.1e-97 360.9 260 68.1
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 4.1e-97 359.0 245 69.8
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 5.9e-96 355.1 267 64.8
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 8.6e-95 351.3 256 69.9
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 1.5e-94 350.5 270 63.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 1.9e-94 350.1 222 77.0
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.2e-92 342.0 212 75.9
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 2.6e-91 339.7 251 66.1
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 6.4e-90 335.1 281 62.6
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.2e-88 330.9 212 73.1
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.6e-88 330.5 273 59.3
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.5e-88 329.3 371 50.9
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 4.3e-86 322.4 260 65.4
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 8.1e-77 291.6 287 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 6.4e-74 282.0 279 52.0
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 4.7e-69 265.8 241 56.0
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.4e-65 254.2 177 67.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 7.1e-65 251.9 251 50.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 4.6e-64 249.2 201 60.7
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 3.9e-63 246.1 273 48.4
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 9.0e-60 235.0 148 75.7
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 2.6e-51 206.8 255 44.7
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.4e-50 201.8 129 72.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 3.0e-39 166.8 105 73.3
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.0e-31 141.7 88 77.3
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.0e-31 140.2 88 77.3
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.2e-27 128.3 81 75.3
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 3.7e-21 106.7 74 68.9
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.9e-19 99.4 65 67.7
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.9e-18 97.1 64 68.8
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 5.5e-17 92.8 261 30.7
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 3.2e-09 67.0 36 77.8
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 1.0e-07 62.0 35 74.3
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 9.7e-06 55.5 157 33.8


User provided reference genes

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