Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G3015 Erigeron canadensis HOM05D000485 ORTHO05D187596 8.3e-51 203.4 100 100.0
ECA233G4383 Erigeron canadensis HOM05D000485 ORTHO05D000341 1.7e-19 99.4 129 49.6
HanXRQChr12g0362281 Helianthus annuus HOM05D000485 ORTHO05D000341 1.5e-15 86.3 130 44.6
HanXRQChr08g0209991 Helianthus annuus HOM05D000485 ORTHO05D000341 5.6e-15 84.3 131 45.0
MD16G1123700 Malus domestica HOM05D000485 ORTHO05D000341 3.4e-12 75.1 129 40.3
Prupe.1G221900 Prunus persica HOM05D000485 ORTHO05D000341 4.5e-12 74.7 129 41.1
HanXRQChr05g0128891 Helianthus annuus HOM05D000485 ORTHO05D000341 2.2e-11 72.4 129 41.1
QL03p051335 Quercus lobata HOM05D000485 ORTHO05D000341 4.9e-11 71.2 129 39.5
Dinv11702 Davidia involucrata HOM05D000485 ORTHO05D000341 6.5e-11 70.9 129 38.8
Lsat_1_v5_gn_0_29161 Lactuca sativa HOM05D000485 ORTHO05D000341 6.5e-11 70.9 131 40.5
MD13G1123000 Malus domestica HOM05D000485 ORTHO05D000341 6.5e-11 70.9 129 41.1
Manes.13G008200 Manihot esculenta HOM05D000485 ORTHO05D000341 6.5e-11 70.9 129 37.2
MELO3C022334.2 Cucumis melo HOM05D000485 ORTHO05D000341 1.1e-10 70.1 129 38.0
TWI18G1407 Tripterygium wilfordii HOM05D000485 ORTHO05D000341 1.4e-10 69.7 129 38.0
TAR374G1652 Trochodendron aralioides HOM05D000485 ORTHO05D000341 1.4e-10 69.7 128 37.5
RcHm_v2.0_Chr4g0429671 Rosa chinensis HOM05D000485 ORTHO05D000341 1.9e-10 69.3 129 38.8
ClCG06G001950 Citrullus lanatus HOM05D000485 ORTHO05D000341 2.5e-10 68.9 129 37.2
FAN07G1693 Fragaria x ananassa HOM05D000485 ORTHO05D000341 2.5e-10 68.9 129 38.8
FAN12G4290 Fragaria x ananassa HOM05D000485 ORTHO05D000341 2.5e-10 68.9 129 38.8
FvH4_4g23320 Fragaria vesca HOM05D000485 ORTHO05D000341 3.2e-10 68.6 129 38.8
Lsat_1_v5_gn_8_147201 Lactuca sativa HOM05D000485 ORTHO05D000341 3.2e-10 68.6 129 39.5
Haze_12454 Corylus avellana HOM05D000485 ORTHO05D000341 4.2e-10 68.2 129 37.2
TAR629G1347 Trochodendron aralioides HOM05D000485 ORTHO05D000341 4.2e-10 68.2 129 36.4
Cfa009394 Carpinus fangiana HOM05D000485 ORTHO05D000341 5.5e-10 67.8 129 37.2
CiPaw.06G105900 Carya illinoinensis HOM05D000485 ORTHO05D000341 5.5e-10 67.8 129 38.0
Dinv17595 Davidia involucrata HOM05D000485 ORTHO05D000341 5.5e-10 67.8 129 37.2
Potri.001G060100 Populus trichocarpa HOM05D000485 ORTHO05D000341 5.5e-10 67.8 129 41.1
CiPaw.05G106300 Carya illinoinensis HOM05D000485 ORTHO05D000341 7.1e-10 67.4 129 38.0
CsaV3_6G008000 Cucumis sativus L. HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 36.4
Glyma.02G096600 Glycine max HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 36.4
Hma1.2p1_0065F.1_g035000 Hydrangea macrophylla HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 37.2
Lj3A1073T45 Lonicera japonica HOM05D000485 ORTHO05D000341 9.3e-10 67.0 130 40.8
THA.LOC104816118 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 37.2
THA.LOC104816119 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 37.2
THA.LOC104816120 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 9.3e-10 67.0 129 37.2
Cpa.g.sc39.26 Carica papaya HOM05D000485 ORTHO05D000341 1.2e-09 66.6 129 34.1
Glyma.18G284700 Glycine max HOM05D000485 ORTHO05D000341 1.2e-09 66.6 129 35.7
Peaxi162Scf00026g00013 Petunia axillaris HOM05D000485 ORTHO05D000341 1.2e-09 66.6 129 35.7
Sabra01G0043100 Salix brachista HOM05D000485 ORTHO05D000341 1.6e-09 66.2 129 41.1
Actinidia39793 Actinidia chinensis HOM05D000485 ORTHO05D000341 2.1e-09 65.9 129 38.0
FAN17G1398 Fragaria x ananassa HOM05D000485 ORTHO05D000341 2.1e-09 65.9 129 38.0
Manes.12G007600 Manihot esculenta HOM05D000485 ORTHO05D000341 2.1e-09 65.9 129 36.4
Solyc01g010000.3 Solanum lycopersicum HOM05D000485 ORTHO05D000341 2.1e-09 65.9 129 36.4
Sopen01g005560 Solanum pennellii HOM05D000485 ORTHO05D000341 2.1e-09 65.9 129 36.4
Cc11_g17280 Coffea canephora HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 38.0
DCAR_024655 Daucus carota HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 36.4
DCAR_024656 Daucus carota HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 36.4
Peaxi162Scf00128g01527 Petunia axillaris HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 38.0
Phvul.008G016800 Phaseolus vulgaris HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 36.4
Sed0027715 Sechium edule HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 36.4
Thecc.02G200600 Theobroma cacao HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 37.2
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.7e-09 65.5 129 36.4
Eucgr.H04608 Eucalyptus grandis HOM05D000485 ORTHO05D000341 3.5e-09 65.1 129 36.4
MBI07_g01999_MAGBIO Magnolia biondii HOM05D000485 ORTHO05D000341 4.6e-09 64.7 130 36.2
PSO017G0566 Papaver somniferum HOM05D000485 ORTHO05D000341 4.6e-09 64.7 129 34.9
PSO478G2910 Papaver somniferum HOM05D000485 ORTHO05D000341 4.6e-09 64.7 129 34.9
PGSC0003DMG400016010 Solanum tuberosum HOM05D000485 ORTHO05D000341 4.6e-09 64.7 129 35.7
Ah.03g135920 Amaranthus hybridus HOM05D000485 ORTHO05D000341 6.0e-09 64.3 131 38.2
THA.LOC104825486 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 6.0e-09 64.3 129 38.0
Nn3g16383 Nelumbo nucifera HOM05D000485 ORTHO05D000341 7.9e-09 63.9 129 33.3
Potri.003G167800 Populus trichocarpa HOM05D000485 ORTHO05D000341 7.9e-09 63.9 129 39.5
Nitab4.5_0000039g0110 Nicotiana tabacum HOM05D000485 ORTHO05D000341 1.0e-08 63.5 129 37.2
Sabra03G0123100 Salix brachista HOM05D000485 ORTHO05D000341 1.0e-08 63.5 129 38.8
Ciclev10031521m.g Citrus clementina HOM05D000485 ORTHO05D000341 1.3e-08 63.2 129 34.9
Hund25482 Selenicereus undatus HOM05D000485 ORTHO05D000341 1.3e-08 63.2 131 35.9
Gorai.002G023100 Gossypium raimondii HOM05D000485 ORTHO05D000341 1.8e-08 62.8 129 35.7
Nitab4.5_0000709g0070 Nicotiana tabacum HOM05D000485 ORTHO05D000341 1.8e-08 62.8 129 37.2
ECA246G4205 Erigeron canadensis HOM05D000485 ORTHO05D000341 2.3e-08 62.4 133 37.6
Gohir.D01G020600 Gossypium hirsutum HOM05D000485 ORTHO05D000341 2.3e-08 62.4 129 35.7
PGR119G0520 Punica granatum HOM05D000485 ORTHO05D000341 2.3e-08 62.4 129 37.2
Hund06109 Selenicereus undatus HOM05D000485 ORTHO05D000341 2.3e-08 62.4 131 36.6
Duzib052G0012 Durio zibethinus HOM05D000485 ORTHO05D000341 3.0e-08 62.0 129 36.4
Gohir.A01G022100 Gossypium hirsutum HOM05D000485 ORTHO05D000341 3.0e-08 62.0 129 35.7
Nitab4.5_0001771g0140 Nicotiana tabacum HOM05D000485 ORTHO05D000341 3.0e-08 62.0 129 35.7
EL10Ac6g13543 Beta vulgaris HOM05D000485 ORTHO05D000341 3.9e-08 61.6 131 36.6
Nn4g22243 Nelumbo nucifera HOM05D000485 ORTHO05D000341 3.9e-08 61.6 130 35.4
Rhsim12G0095400 Rhododendron simsii HOM05D000485 ORTHO05D000341 3.9e-08 61.6 131 38.2
Atru.chr11.2374 Acer truncatum HOM05D000485 ORTHO05D000341 5.1e-08 61.2 129 36.4
COL.COLO4_20510 Corchorus olitorius HOM05D000485 ORTHO05D000341 5.1e-08 61.2 132 38.6
Aqoxy3G01634 Aquilegia oxysepala HOM05D000485 ORTHO05D000341 6.7e-08 60.8 129 33.3
Actinidia09622 Actinidia chinensis HOM05D000485 ORTHO05D000341 1.5e-07 59.7 133 36.8
CAN.G1279.1 Capsicum annuum HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 33.3
Ca_07138_v3 Cicer arietinum L. HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 34.1
MELO3C017747.2 Cucumis melo HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 36.4
Nitab4.5_0004878g0050 Nicotiana tabacum HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 34.9
PSO017G4172 Papaver somniferum HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 31.0
PSO478G4737 Papaver somniferum HOM05D000485 ORTHO05D000341 1.5e-07 59.7 129 31.0
Psat3g186320 Pisum sativum HOM05D000485 ORTHO05D000341 1.5e-07 59.7 130 35.4
CDE05G0512 Ceratophyllum demersum HOM05D000485 ORTHO05D000341 1.9e-07 59.3 129 34.9
ClCG07G015380 Citrullus lanatus HOM05D000485 ORTHO05D000341 1.9e-07 59.3 129 37.2
CSS0015277 Camellia sinensis var. sinensis HOM05D000485 ORTHO05D000341 2.5e-07 58.9 130 35.4
TWI36G1415 Tripterygium wilfordii HOM05D000485 ORTHO05D000341 2.5e-07 58.9 129 35.7
GSVIVG01000917001 Vitis vinifera HOM05D000485 ORTHO05D000341 3.3e-07 58.5 129 34.9
TPR.G2952 Trifolium pratense HOM05D000485 ORTHO05D000341 5.7e-07 57.8 130 34.6
Psat3g186040 Pisum sativum HOM05D000485 ORTHO05D000341 7.4e-07 57.4 130 33.8
vmacro16093 Vaccinium macrocarpon HOM05D000485 ORTHO05D000341 7.4e-07 57.4 131 36.6
MSTRG.478 Avicennia marina HOM05D000485 ORTHO05D000341 9.6e-07 57.0 129 35.7
CANSAT01G1205 Cannabis sativa HOM05D000485 ORTHO05D000341 1.3e-06 56.6 130 34.6
Migut.K01009 Erythranthe guttata HOM05D000485 ORTHO05D000341 1.3e-06 56.6 138 34.1
Oeu001322.1 Olea europaea HOM05D000485 ORTHO05D000341 1.3e-06 56.6 129 35.7
Oeu012654.2 Olea europaea HOM05D000485 ORTHO05D000341 1.6e-06 56.2 130 33.8
Lj1g0007260 Lotus japonicus HOM05D000485 ORTHO05D000341 2.1e-06 55.8 129 33.3
Medtr7g022470 Medicago truncatula HOM05D000485 ORTHO05D000341 2.8e-06 55.5 130 33.1
Sc04g0010330 Simmondsia chinensis HOM05D000485 ORTHO05D000341 2.8e-06 55.5 131 35.9
HPP92_003193 Vanilla planifolia HOM05D000485 ORTHO05D000341 3.7e-06 55.1 131 37.4
Lalb_Chr04g0258011 Lupinus albus HOM05D000485 ORTHO05D000341 4.8e-06 54.7 132 36.4
AUR62028896 Chenopodium quinoa HOM05D000485 ORTHO05D000341 6.2e-06 54.3 131 35.9
HPP92_000341 Vanilla planifolia HOM05D000485 ORTHO05D000341 6.2e-06 54.3 132 35.6
AUR62005657 Chenopodium quinoa HOM05D000485 ORTHO05D000341 8.2e-06 53.9 131 35.1
SEGI_05578 Sequoiadendron giganteum HOM05D000485 ORTHO05D000341 8.2e-06 53.9 136 33.1


User provided reference genes

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