Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 2.3e-296 1021.5 531 100.0
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 8.1e-246 853.6 537 83.1
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 4.5e-236 821.2 530 80.8
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 6.1e-225 784.3 537 75.6
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.6e-212 742.3 543 69.6
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 1.7e-211 739.6 536 69.4
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.0e-204 716.1 549 67.6
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.9e-202 709.5 536 68.8
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 2.5e-202 709.1 528 70.5
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 5.5e-202 708.0 549 66.8
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 2.7e-201 705.7 538 66.5
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 3.4e-199 698.7 518 68.1
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 3.4e-199 698.7 522 68.0
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 3.4e-199 698.7 510 70.0
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 7.5e-199 697.6 539 67.0
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.3e-198 696.8 500 70.4
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 3.7e-198 695.3 460 73.0
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 3.1e-197 692.2 461 74.4
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 1.2e-196 690.3 483 71.0
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.0e-196 689.5 489 70.8
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 2.7e-196 689.1 492 69.5
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 2.7e-196 689.1 524 67.0
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 2.7e-196 689.1 463 73.0
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.5e-196 688.7 524 67.0
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 4.5e-196 688.3 537 66.1
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 5.9e-196 688.0 495 68.7
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 7.7e-196 687.6 549 64.8
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.9e-195 685.6 507 68.2
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 8.5e-195 684.1 479 70.8
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 1.1e-194 683.7 526 66.3
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 2.5e-194 682.6 495 69.3
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 3.2e-194 682.2 545 64.6
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.5e-194 681.4 536 65.7
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 5.5e-194 681.4 497 67.0
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 7.2e-194 681.0 525 67.2
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 7.2e-194 681.0 536 64.7
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.6e-193 679.9 549 64.1
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 2.1e-193 679.5 515 66.6
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 4.7e-193 678.3 532 64.7
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 6.1e-193 677.9 486 70.4
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 8.0e-193 677.6 541 64.5
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.0e-192 677.2 523 66.7
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 1.0e-192 677.2 474 69.6
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 5.2e-192 674.9 524 66.8
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 6.8e-192 674.5 458 72.1
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 8.8e-192 674.1 525 65.7
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 8.8e-192 674.1 479 70.6
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 8.8e-192 674.1 521 65.5
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.2e-191 673.7 533 64.5
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 2.0e-191 672.9 518 65.8
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.6e-191 672.5 524 66.0
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.7e-190 668.7 544 62.5
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 1.8e-189 666.4 548 64.1
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 3.1e-189 665.6 523 64.8
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.1e-189 665.6 533 64.7
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 4.1e-189 665.2 473 68.5
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 3.5e-188 662.1 476 68.7
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 3.3e-186 655.6 537 62.4
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 4.7e-185 651.7 506 65.0
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 6.1e-185 651.4 541 61.6
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.4e-184 650.2 472 66.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 1.8e-184 649.8 442 70.8
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 2.3e-184 649.4 472 66.1
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 3.0e-184 649.0 474 66.2
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 1.2e-183 647.1 457 68.5
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 1.5e-183 646.7 485 66.0
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.5e-183 646.7 518 62.4
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 4.4e-183 645.2 527 63.4
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 7.5e-183 644.4 474 65.2
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.3e-182 643.7 474 65.8
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.3e-182 643.7 542 60.1
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 2.2e-182 642.9 473 65.5
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 2.9e-182 642.5 487 65.1
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.1e-181 640.6 440 69.3
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 5.4e-181 638.3 476 65.8
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 7.0e-181 637.9 562 58.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.0e-179 634.0 540 59.1
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 1.0e-179 634.0 508 64.4
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.6e-177 626.7 539 59.4
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 6.2e-177 624.8 553 61.7
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 1.2e-175 620.5 508 61.4
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 8.3e-174 614.4 544 58.3
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.0e-173 611.3 516 62.2
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 9.2e-173 610.9 544 57.9
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 8.6e-171 604.4 457 64.3
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.1e-170 604.0 450 65.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 1.2e-169 600.5 450 65.3
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 2.0e-167 593.2 538 58.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 3.7e-166 589.0 441 64.9
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 8.3e-166 587.8 523 57.4
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.5e-164 582.4 530 56.6
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 5.1e-163 578.6 474 61.4
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 1.0e-155 554.3 503 54.7
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.4e-152 543.1 453 56.3
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 3.6e-145 519.2 488 56.1
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 1.1e-144 517.7 533 52.9
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 1.2e-143 514.2 373 69.2
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.4e-141 507.3 481 57.4
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 5.3e-136 488.8 433 56.1
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 4.5e-135 485.7 479 49.9
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 2.2e-126 456.8 502 47.2
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 1.0e-123 448.0 459 48.8
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.3e-123 446.8 408 54.9
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 3.3e-122 443.0 515 44.7
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.0e-119 433.7 368 59.8
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 4.5e-119 432.6 468 45.9
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 6.1e-116 422.2 487 45.4
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.2e-108 397.9 307 63.8
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 3.9e-107 392.9 439 42.8
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 3.7e-73 280.0 465 33.1
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 1.6e-60 238.0 425 32.2
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 6.2e-52 209.5 381 39.6
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 8.9e-51 205.7 137 69.3
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 2.8e-44 184.1 136 64.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 2.2e-41 174.5 137 63.5
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.6e-39 168.3 107 77.6
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.8e-35 154.8 251 37.5
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 1.7e-33 148.3 487 25.1
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 2.9e-25 120.9 94 63.8
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 6.4e-25 119.8 92 62.0
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 4.6e-23 113.6 68 77.9
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 1.8e-22 111.7 114 56.1
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 5.6e-21 106.7 208 34.6
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 1.6e-20 105.1 120 53.3
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.1e-19 102.4 195 33.3
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.4e-18 97.4 220 30.0
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.7e-15 87.8 80 60.0
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 1.3e-12 79.0 417 23.7
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 4.2e-08 63.9 113 39.8
BolC9t57452H Brassica oleracea HOM05D006019 ORTHO05D000049 2.1e-07 61.6 50 62.0


User provided reference genes

Program Settings