Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 2.1e-137 492.3 237 100.0
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 6.4e-110 401.0 225 84.4
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 2.5e-106 389.0 226 82.3
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 5.9e-95 351.3 225 74.7
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.3e-94 350.1 233 73.8
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.9e-94 349.0 236 69.9
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 3.8e-94 348.6 226 75.7
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.0e-94 348.2 236 69.9
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 8.5e-94 347.4 223 75.3
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 8.5e-94 347.4 222 74.3
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.1e-93 347.1 235 72.3
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 4.2e-93 345.1 228 71.1
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 5.5e-93 344.7 229 74.7
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 7.2e-93 344.4 226 73.5
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 1.6e-92 343.2 233 72.5
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 1.6e-92 343.2 230 71.7
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 2.1e-92 342.8 219 75.3
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.1e-92 342.8 228 71.5
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.7e-92 342.4 233 71.7
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 3.6e-92 342.0 235 70.6
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 1.8e-91 339.7 226 73.0
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 3.9e-91 338.6 228 71.1
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 5.1e-91 338.2 218 73.9
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 6.7e-91 337.8 233 70.8
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 6.7e-91 337.8 216 73.6
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 6.7e-91 337.8 217 73.7
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 8.8e-91 337.4 218 73.4
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.1e-90 337.0 223 74.0
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.1e-90 337.0 218 73.4
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 1.1e-90 337.0 218 72.9
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 1.1e-90 337.0 218 72.9
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.5e-90 336.7 216 72.7
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 1.5e-90 336.7 225 72.4
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 2.0e-90 336.3 227 68.7
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 3.3e-90 335.5 224 69.2
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.3e-90 335.5 218 73.4
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 5.7e-90 334.7 230 70.0
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 7.4e-90 334.3 215 71.6
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 9.7e-90 334.0 229 68.6
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 9.7e-90 334.0 213 73.7
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 9.7e-90 334.0 223 70.9
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 9.7e-90 334.0 238 68.9
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 3.7e-89 332.0 224 70.1
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 3.7e-89 332.0 229 68.6
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 4.8e-89 331.6 219 72.6
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 4.8e-89 331.6 216 74.1
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 6.3e-89 331.3 224 70.5
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 6.3e-89 331.3 230 69.1
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 6.3e-89 331.3 214 72.9
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.8e-88 329.7 218 72.0
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.1e-88 328.9 234 68.8
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 4.1e-88 328.6 221 70.6
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 4.1e-88 328.6 221 71.0
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 5.3e-88 328.2 216 71.3
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 9.1e-88 327.4 225 68.4
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 9.1e-88 327.4 221 69.7
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 9.1e-88 327.4 222 72.1
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 9.1e-88 327.4 218 72.0
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.2e-87 327.0 230 67.4
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.5e-87 326.6 221 71.5
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.5e-87 326.6 221 70.1
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 1.5e-87 326.6 221 69.7
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 2.0e-87 326.2 216 70.4
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 2.0e-87 326.2 220 70.5
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 2.6e-87 325.9 221 70.6
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 3.4e-87 325.5 216 73.1
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 7.7e-87 324.3 230 69.1
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 7.7e-87 324.3 216 70.8
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 1.0e-86 323.9 226 66.8
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.3e-86 323.6 216 69.0
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 1.7e-86 323.2 225 68.4
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 2.2e-86 322.8 229 68.1
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 2.2e-86 322.8 227 67.8
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 3.8e-86 322.0 233 67.8
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 3.8e-86 322.0 203 72.4
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 6.5e-86 321.2 233 67.4
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 8.5e-86 320.9 229 67.7
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.1e-85 320.5 219 69.4
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 1.1e-85 320.5 223 68.2
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.4e-85 320.1 235 67.7
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 1.9e-85 319.7 233 67.0
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.9e-85 319.7 190 75.3
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 2.5e-85 319.3 216 68.5
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 4.2e-85 318.5 242 64.0
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 1.2e-84 317.0 214 72.4
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.1e-84 316.2 226 67.7
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 2.7e-84 315.8 216 68.5
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 3.6e-84 315.5 262 62.6
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 3.6e-84 315.5 222 65.8
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 4.7e-84 315.1 219 66.7
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 7.9e-84 314.3 230 65.7
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.0e-83 313.9 210 72.9
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.0e-83 313.9 229 65.9
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 1.8e-83 313.2 222 67.6
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 3.0e-83 312.4 226 65.5
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 3.0e-83 312.4 219 67.1
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 2.6e-82 309.3 224 66.5
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.6e-82 309.3 255 57.6
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 5.7e-82 308.1 219 68.5
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 5.7e-82 308.1 224 66.1
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 5.7e-82 308.1 224 66.1
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 2.2e-81 306.2 223 65.5
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.8e-81 305.8 285 56.1
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 2.8e-81 305.8 216 67.1
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.0e-79 299.7 231 64.9
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.0e-78 295.0 219 63.9
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.7e-76 288.5 214 65.4
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.8e-75 284.3 243 60.1
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.1e-74 283.9 378 43.9
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 5.9e-71 271.6 211 61.1
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.5e-70 268.1 193 69.4
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 9.4e-69 264.2 228 59.2
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.1e-68 263.1 185 69.2
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 2.3e-67 259.6 183 68.3
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 8.8e-67 257.7 218 63.8
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.7e-65 253.4 192 65.1
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 5.9e-63 245.0 249 55.0
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.9e-62 242.7 229 55.0
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 3.8e-62 242.3 132 79.5
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.4e-59 233.8 228 54.8
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 2.3e-59 233.0 162 64.8
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 2.6e-58 229.6 181 62.4
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.3e-57 227.3 170 64.7
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 2.8e-57 226.1 126 76.2
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 7.0e-56 221.5 225 52.9
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 1.9e-53 213.4 163 65.0
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 3.6e-52 209.1 132 70.5
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.9e-51 204.5 130 70.0
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 1.1e-45 187.6 133 60.9
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 7.3e-45 184.9 136 69.9
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 5.4e-40 168.7 135 63.0
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 9.2e-40 167.9 153 57.5
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 2.3e-38 163.3 172 47.1
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 4.4e-34 149.1 95 64.2
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 2.5e-29 133.3 83 69.9
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 6.2e-20 102.1 126 44.4
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.4e-08 63.5 78 53.8
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 5.4e-08 62.4 89 48.3
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.3e-08 61.6 32 78.1


User provided reference genes

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