Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2590 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.4e-258 894.4 439 100.0
ECA240G3793 Erigeron canadensis HOM05D003482 ORTHO05D004194 4.7e-199 698.0 424 80.7
ECA240G0557 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.5e-192 676.4 425 77.9
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 9.6e-184 647.1 464 68.3
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 3.6e-183 645.2 465 69.5
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 9.9e-181 637.1 463 68.0
Lsat_1_v5_gn_5_58881 Lactuca sativa HOM05D003482 ORTHO05D004194 2.9e-180 635.6 448 69.4
ECA240G4147 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.4e-179 633.3 433 73.4
Lsat_1_v5_gn_5_58361 Lactuca sativa HOM05D003482 ORTHO05D004194 5.6e-176 621.3 452 69.0
Lsat_1_v5_gn_5_58921 Lactuca sativa HOM05D003482 ORTHO05D004194 1.6e-175 619.8 440 70.2
Lsat_1_v5_gn_5_59000 Lactuca sativa HOM05D003482 ORTHO05D004194 1.6e-175 619.8 439 69.0
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 6.2e-175 617.8 459 67.3
ECA240G0756 Erigeron canadensis HOM05D003482 ORTHO05D004194 2.4e-174 615.9 427 71.7
HanXRQChr13g0411981 Helianthus annuus HOM05D003482 ORTHO05D004194 3.3e-168 595.5 433 69.1
HanXRQChr13g0412011 Helianthus annuus HOM05D003482 ORTHO05D004194 3.4e-165 585.5 433 67.2
ECA240G2186 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.6e-159 566.6 425 68.0
Lsat_1_v5_gn_5_60400 Lactuca sativa HOM05D003482 ORTHO05D004194 1.5e-157 560.1 397 67.8
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 1.1e-155 553.9 439 62.4
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 1.5e-152 543.5 497 56.9
TWI34G0517 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 3.3e-152 542.3 440 59.5
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 2.8e-151 539.3 483 58.2
Lsat_1_v5_gn_5_60580 Lactuca sativa HOM05D003482 ORTHO05D004194 2.4e-150 536.2 554 52.7
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 2.4e-150 536.2 468 56.2
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 3.1e-150 535.8 502 55.4
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 3.1e-150 535.8 501 54.5
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 5.3e-150 535.0 493 55.8
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 5.3e-150 535.0 503 54.5
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 1.2e-149 533.9 502 56.0
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.5e-149 533.5 498 55.4
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 2.0e-149 533.1 461 58.4
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 7.7e-149 531.2 445 59.8
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.4e-147 526.9 489 54.0
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.5e-147 526.2 496 53.4
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 3.2e-147 525.8 500 53.6
Nitab4.5_0000970g0010 Nicotiana tabacum HOM05D003482 ORTHO05D004194 5.5e-147 525.0 485 53.4
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 5.5e-147 525.0 499 54.1
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 7.2e-147 524.6 508 53.9
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.2e-146 523.9 487 55.6
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 3.6e-146 522.3 473 56.4
Sabra18G0008800 Salix brachista HOM05D003482 ORTHO05D004194 6.1e-146 521.5 502 53.8
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 1.4e-145 520.4 481 53.6
Lsat_1_v5_gn_5_60480 Lactuca sativa HOM05D003482 ORTHO05D004194 3.0e-145 519.2 437 61.8
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 5.1e-145 518.5 492 54.9
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 8.8e-145 517.7 500 53.2
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 1.5e-144 516.9 494 53.0
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 1.5e-144 516.9 482 55.0
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 1.5e-144 516.9 478 55.4
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 2.5e-144 516.2 490 53.1
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 5.7e-144 515.0 479 55.9
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 1.3e-143 513.8 485 53.8
Haze_21807 Corylus avellana HOM05D003482 ORTHO05D004194 1.3e-143 513.8 523 50.9
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 1.3e-143 513.8 481 56.5
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 1.3e-143 513.8 474 54.6
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 1.7e-143 513.5 529 51.6
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 1.7e-143 513.5 529 51.4
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 2.2e-143 513.1 475 54.1
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 2.2e-143 513.1 475 54.1
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 2.2e-143 513.1 479 55.7
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 2.2e-143 513.1 503 53.7
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 3.7e-143 512.3 490 53.3
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 4.8e-143 511.9 475 54.1
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 6.3e-143 511.5 491 54.0
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 6.3e-143 511.5 491 54.4
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 6.3e-143 511.5 486 54.1
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 8.2e-143 511.1 474 54.4
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 1.1e-142 510.8 498 53.0
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 1.1e-142 510.8 486 53.9
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 1.4e-142 510.4 492 52.0
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 1.4e-142 510.4 481 54.9
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 1.8e-142 510.0 483 54.5
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 1.8e-142 510.0 476 54.0
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 1.8e-142 510.0 496 53.8
Lsat_1_v5_gn_5_60420 Lactuca sativa HOM05D003482 ORTHO05D004194 1.8e-142 510.0 443 59.8
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 2.4e-142 509.6 484 52.3
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 2.4e-142 509.6 489 55.0
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 3.1e-142 509.2 475 53.7
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 4.1e-142 508.8 540 50.9
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 6.9e-142 508.1 487 52.0
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 9.1e-142 507.7 492 52.6
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 1.2e-141 507.3 487 52.0
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 1.2e-141 507.3 487 52.0
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 1.2e-141 507.3 483 55.1
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 1.2e-141 507.3 480 54.2
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 2.6e-141 506.1 476 53.4
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 4.5e-141 505.4 487 52.2
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 5.9e-141 505.0 499 51.9
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 1.3e-140 503.8 493 52.7
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 2.2e-140 503.1 486 54.3
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 2.9e-140 502.7 490 54.1
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 2.9e-140 502.7 542 49.6
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 2.9e-140 502.7 490 53.7
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.8e-140 502.3 414 60.6
VMungo0647G1298 Vigna mungo HOM05D003482 ORTHO05D004194 5.0e-140 501.9 491 53.4
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 1.1e-139 500.7 493 53.5
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 2.5e-139 499.6 476 54.2
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 2.5e-139 499.6 494 52.8
Hund03269 Selenicereus undatus HOM05D003482 ORTHO05D004194 1.2e-138 497.3 493 52.3
FvH4_2g36372 Fragaria vesca HOM05D003482 ORTHO05D004194 6.1e-138 495.0 429 57.8
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 1.0e-137 494.2 495 51.9
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 1.8e-137 493.4 499 52.1
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 2.3e-137 493.0 497 53.1
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 3.9e-137 492.3 498 53.6
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 5.1e-137 491.9 476 52.5
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 8.8e-137 491.1 429 57.3
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 2.6e-136 489.6 490 52.4
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 2.6e-136 489.6 478 53.1
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 4.4e-136 488.8 493 52.5
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 5.7e-136 488.4 473 53.9
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 9.7e-136 487.6 473 53.9
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 1.7e-135 486.9 492 52.8
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 1.1e-134 484.2 458 54.8
HanXRQChr03g0082871 Helianthus annuus HOM05D003482 ORTHO05D004194 6.5e-132 474.9 357 67.5
PGSC0003DMG400029592 Solanum tuberosum HOM05D003482 ORTHO05D004194 3.2e-131 472.6 441 52.6
HanXRQChr13g0411841 Helianthus annuus HOM05D003482 ORTHO05D004194 6.7e-129 464.9 342 67.3
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 1.1e-128 464.2 484 49.0
HanXRQChr13g0407961 Helianthus annuus HOM05D003482 ORTHO05D004194 1.3e-127 460.7 345 66.1
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 2.8e-127 459.5 494 49.8
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 4.1e-126 455.7 487 49.9
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 5.3e-126 455.3 485 49.7
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 7.0e-126 454.9 485 49.5
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 1.6e-125 453.8 479 50.1
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 4.7e-122 442.2 480 47.9
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 7.5e-120 434.9 487 47.8
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 1.3e-119 434.1 572 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 1.7e-119 433.7 449 48.8
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 9.4e-115 417.9 326 63.2
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 2.1e-114 416.8 463 48.8
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 2.1e-114 416.8 471 48.2
HanXRQChr13g0412001 Helianthus annuus HOM05D003482 ORTHO05D004194 4.7e-114 415.6 324 65.4
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 5.2e-113 412.1 327 64.5
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 3.4e-112 409.5 480 46.9
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 4.4e-112 409.1 463 48.4
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.2e-109 401.0 442 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3217 Anthoceros agrestis HOM05D003482 ORTHO05D004194 1.6e-109 400.6 442 45.5
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 1.7e-108 397.1 468 46.6
MD15G1102100 Malus domestica HOM05D003482 ORTHO05D004194 9.5e-107 391.3 411 51.3
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 3.4e-96 356.3 251 66.9
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 4.3e-91 339.3 216 70.4
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 9.5e-91 338.2 221 69.7
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 3.6e-90 336.3 228 66.7
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 1.8e-89 334.0 210 71.0
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 1.9e-83 313.9 433 42.5
TPR.G12040 Trifolium pratense HOM05D003482 ORTHO05D004194 3.6e-82 309.7 391 45.3
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 2.8e-74 283.5 224 54.9
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.8e-73 280.8 179 70.4
ECA240G1043 Erigeron canadensis HOM05D003482 ORTHO05D004194 6.0e-69 265.8 213 67.1
Sabra18G0012500 Salix brachista HOM05D000009 ORTHO05D000008 1.7e-63 247.7 179 65.4
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 4.5e-56 223.0 141 70.9
SEGI_21174 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 7.6e-56 222.2 315 43.8
vmacro05099 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 7.1e-54 215.7 288 46.9
Potri.018G004500 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.2e-53 214.9 180 61.1
SEGI_21512 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 6.0e-53 212.6 142 63.4
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 8.1e-50 202.2 126 75.4
Oeu059293.1 Olea europaea HOM05D003482 ORTHO05D004194 6.2e-42 176.0 215 43.7
Cc00_g11230 Coffea canephora HOM05D003482 ORTHO05D004194 3.1e-41 173.7 235 40.9
HanXRQChr13g0411991 Helianthus annuus HOM05D003482 ORTHO05D004194 2.7e-37 160.6 98 82.7
Lsat_1_v5_gn_7_104720 Lactuca sativa HOM05D003482 ORTHO05D004194 1.8e-36 157.9 107 62.6
Sabra18G0005800 Salix brachista HOM05D003482 ORTHO05D004194 1.5e-35 154.8 144 59.7
Sabra18G0007800 Salix brachista HOM05D003482 ORTHO05D004194 1.5e-35 154.8 144 59.7
ECA240G1890 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.9e-35 154.5 99 78.8
PSO832G2792 Papaver somniferum HOM05D003482 ORTHO05D004194 3.3e-27 127.1 153 45.8
Nitab4.5_0000502g0210 Nicotiana tabacum HOM05D003482 ORTHO05D019565 3.1e-25 120.6 178 35.4
Lalb_Chr22g0361021 Lupinus albus HOM05D003482 ORTHO05D004194 1.7e-23 114.8 108 49.1
Lsat_1_v5_gn_5_60320 Lactuca sativa HOM05D003482 ORTHO05D004194 4.8e-18 96.7 91 58.2
Lsat_1_v5_gn_5_60340 Lactuca sativa HOM05D003482 ORTHO05D004194 3.1e-17 94.0 63 60.3
PSO058G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 1.2e-16 92.0 108 46.3
CDE05G2143 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 6.1e-13 79.7 99 52.5
Sabra18G0012600 Salix brachista HOM05D003482 ORTHO05D010018 1.7e-10 71.6 97 39.2
CBR_g40631 Chara braunii HOM05D002830 ORTHO05D002258 2.2e-10 71.2 148 32.4
AagrBONN_evm.TU.Sc2ySwM_117.3511 Anthoceros agrestis HOM05D022213 ORTHO05D002258 1.6e-08 65.1 156 29.5
Cre03.g186250 Chlamydomonas reinhardtii HOM05D012891 ORTHO05D014812 4.5e-08 63.5 147 30.6
Cfa024898 Carpinus fangiana HOM05D003482 ORTHO05D043602 1.3e-07 62.0 261 20.7
Mapoly0048s0069 Marchantia polymorpha HOM05D022213 ORTHO05D002258 2.9e-07 60.8 139 28.8
Pp3s42_110 Physcomitrium patens HOM05D055763 ORTHO05D315969 3.8e-07 60.5 163 23.9
Potri.012G082950 Populus trichocarpa HOM05D003482 ORTHO05D004194 8.5e-07 59.3 46 65.2
Ah.09g235230 Amaranthus hybridus HOM05D002688 ORTHO05D002911 1.9e-06 58.2 33 81.8


User provided reference genes

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