Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.4e-81 306.2 155 100.0
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 8.7e-47 190.7 159 65.4
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 5.6e-46 188.0 126 75.4
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 2.4e-41 172.6 160 59.4
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.0e-39 167.2 162 59.9
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.3e-39 166.0 155 60.6
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.0e-39 165.6 163 57.1
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 5.1e-39 164.9 155 59.4
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.5e-38 162.5 158 57.6
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 3.3e-38 162.2 155 56.8
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 4.3e-38 161.8 159 57.2
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 9.6e-38 160.6 162 59.3
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.3e-37 160.2 150 54.0
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 2.8e-37 159.1 154 58.4
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 4.8e-37 158.3 162 54.3
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 4.8e-37 158.3 153 58.2
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 6.2e-37 157.9 153 54.2
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 6.2e-37 157.9 132 61.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 1.1e-36 157.1 159 54.1
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 2.4e-36 156.0 158 52.5
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 2.4e-36 156.0 124 61.3
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 3.1e-36 155.6 161 55.9
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 3.1e-36 155.6 160 56.2
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.0e-36 155.2 155 54.2
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 5.3e-36 154.8 161 59.0
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 6.9e-36 154.5 156 56.4
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 9.0e-36 154.1 161 55.9
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.5e-35 153.3 160 53.1
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 1.5e-35 153.3 155 54.2
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 2.0e-35 152.9 125 60.8
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 2.0e-35 152.9 125 60.8
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 2.6e-35 152.5 156 52.6
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 5.8e-35 151.4 128 62.5
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 7.6e-35 151.0 120 63.3
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-34 150.2 160 53.8
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.3e-34 150.2 141 56.7
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.7e-34 149.8 155 53.5
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.7e-34 149.8 156 50.6
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.7e-34 149.8 156 50.6
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.2e-34 149.4 156 52.6
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 2.2e-34 149.4 162 54.3
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 3.8e-34 148.7 166 54.2
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 3.8e-34 148.7 166 54.2
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 3.8e-34 148.7 155 54.2
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 4.9e-34 148.3 149 55.7
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 4.9e-34 148.3 149 55.7
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 6.4e-34 147.9 149 55.7
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.4e-33 146.7 130 60.0
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 1.9e-33 146.4 166 54.2
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 1.9e-33 146.4 166 54.2
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 1.9e-33 146.4 135 57.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 2.4e-33 146.0 156 53.8
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.4e-33 146.0 155 51.6
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 4.2e-33 145.2 149 55.7
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 5.4e-33 144.8 118 58.5
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 5.4e-33 144.8 156 51.9
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 5.4e-33 144.8 119 61.3
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 7.1e-33 144.4 154 51.9
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 7.1e-33 144.4 157 52.2
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 9.3e-33 144.1 157 54.1
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 9.3e-33 144.1 122 58.2
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.2e-32 143.7 122 57.4
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.6e-32 143.3 164 53.7
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.6e-32 143.3 122 57.4
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 3.5e-32 142.1 128 56.2
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 7.9e-32 141.0 158 52.5
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.0e-31 140.6 133 60.2
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 2.3e-31 139.4 158 53.2
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 3.0e-31 139.0 159 52.2
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 3.0e-31 139.0 128 57.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 3.9e-31 138.7 147 51.7
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 3.9e-31 138.7 141 53.9
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 8.7e-31 137.5 159 50.3
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 8.7e-31 137.5 133 56.4
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 8.7e-31 137.5 124 54.0
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.1e-30 137.1 155 50.3
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.9e-30 136.3 155 50.3
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 2.5e-30 136.0 152 52.6
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 7.4e-30 134.4 161 50.9
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 9.6e-30 134.0 146 49.3
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.3e-29 133.7 129 55.0
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 2.1e-29 132.9 124 54.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.8e-29 132.5 154 50.6
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 3.7e-29 132.1 124 53.2
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.8e-29 131.7 120 57.5
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 8.1e-29 131.0 155 49.7
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.4e-28 130.2 128 55.5
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.4e-28 130.2 131 49.6
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 2.4e-28 129.4 158 46.2
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 5.3e-28 128.3 155 48.4
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.2e-27 127.1 114 57.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 5.8e-27 124.8 114 51.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.3e-26 123.6 155 48.4
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 8.4e-26 120.9 128 53.9
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.2e-24 117.1 81 67.9
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 2.7e-24 115.9 156 43.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 2.3e-23 112.8 105 52.4
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.3e-23 112.8 88 59.1
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 5.1e-23 111.7 105 54.3
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.1e-22 110.5 103 54.4
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.5e-22 110.2 99 55.6
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.5e-22 109.4 122 50.8
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.1e-17 91.3 128 45.3
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 3.5e-16 89.0 122 41.0
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 2.8e-13 79.3 74 50.0
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.8e-13 78.6 65 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 2.4e-12 76.3 78 48.7
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 2.4e-12 76.3 133 36.8
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 2.0e-11 73.2 59 52.5
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.0e-10 70.9 97 39.2
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.3e-07 59.7 115 28.7


User provided reference genes

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