Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 8.7e-243 843.2 418 100.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 2.6e-191 672.2 426 79.1
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.6e-178 629.0 434 74.7
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.5e-170 603.2 438 69.2
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.1e-168 597.0 440 68.4
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 4.1e-168 595.1 442 67.9
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 7.7e-167 590.9 440 68.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.5e-165 585.9 445 67.0
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 9.5e-165 583.9 428 68.5
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.6e-164 582.0 428 67.3
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.0e-163 578.9 434 65.7
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 6.8e-163 577.8 439 65.1
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.6e-162 575.9 435 66.0
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.3e-161 573.5 437 65.4
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.7e-161 573.2 440 65.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.7e-161 572.0 439 66.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 4.9e-161 571.6 444 65.1
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 3.2e-160 568.9 442 65.2
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 3.2e-160 568.9 434 65.0
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 4.1e-160 568.5 443 64.6
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 7.0e-160 567.8 451 64.3
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.6e-159 565.1 438 64.6
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.9e-159 564.7 436 65.1
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.3e-158 562.8 436 64.4
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 8.6e-158 560.8 438 64.2
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 2.5e-157 559.3 426 64.3
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 7.3e-157 557.8 426 64.1
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 6.2e-156 554.7 430 65.8
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.8e-155 553.1 427 65.1
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 3.1e-155 552.4 461 62.9
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 1.5e-154 550.1 428 63.6
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 6.4e-153 544.7 441 63.0
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.4e-152 543.5 434 63.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.4e-152 543.5 422 64.9
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.9e-152 543.1 428 62.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 9.2e-152 540.8 428 62.1
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.7e-151 539.3 436 63.1
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 6.0e-151 538.1 449 62.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 7.8e-151 537.7 459 60.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 7.8e-151 537.7 436 63.3
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.0e-150 537.3 449 62.1
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 2.3e-150 536.2 387 69.0
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.0e-150 535.8 436 65.6
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.5e-149 533.5 427 62.5
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 3.6e-148 528.9 451 60.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.7e-148 528.5 455 61.1
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 8.1e-148 527.7 452 60.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.4e-147 526.9 428 62.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.4e-147 526.9 440 61.8
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 2.3e-147 526.2 425 63.3
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 4.0e-147 525.4 450 60.4
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 6.8e-147 524.6 440 62.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 8.9e-147 524.2 428 61.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 3.4e-146 522.3 442 60.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.3e-145 520.4 430 60.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.3e-145 520.4 448 58.7
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.7e-145 520.0 438 61.6
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 2.9e-145 519.2 440 60.2
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 4.9e-145 518.5 438 61.4
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 6.4e-145 518.1 460 59.3
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.9e-144 516.5 437 61.3
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.2e-143 513.8 430 59.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.7e-143 512.7 396 63.4
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 3.5e-143 512.3 434 60.8
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 5.1e-142 508.4 428 59.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 8.6e-142 507.7 495 56.0
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.1e-141 507.3 446 57.8
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.5e-141 506.1 306 76.8
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.5e-141 506.1 447 57.0
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 7.3e-141 504.6 432 61.3
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.8e-139 500.0 474 56.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.0e-139 498.8 422 60.0
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.3e-137 493.8 434 58.3
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.3e-137 493.8 427 60.4
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 6.4e-137 491.5 331 70.1
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.2e-135 487.3 476 54.4
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 4.6e-135 485.3 434 57.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 7.8e-135 484.6 431 59.2
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.0e-134 484.2 301 75.1
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 3.9e-134 482.3 421 59.1
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 8.6e-134 481.1 510 50.2
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 4.3e-133 478.8 433 57.5
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 4.3e-133 478.8 432 59.0
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 5.6e-133 478.4 395 58.0
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 9.6e-133 477.6 299 72.6
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.1e-131 472.6 300 70.7
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 3.1e-123 446.0 446 54.3
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.1e-119 433.3 385 60.0
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 4.3e-117 425.6 453 51.9
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.9e-113 412.1 295 65.4
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.0e-110 402.9 369 58.8
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 5.1e-110 402.1 424 48.8
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.4e-109 398.3 332 58.1
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 7.4e-109 398.3 332 58.1
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 2.9e-105 386.3 393 52.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-104 384.4 230 76.1
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 1.4e-104 384.0 266 67.3
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 5.5e-104 382.1 355 59.4
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 5.5e-104 382.1 303 60.4
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.5e-103 379.4 220 79.5
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.8e-100 369.8 334 57.8
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.4e-99 367.5 332 57.5
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.2e-97 360.1 343 54.5
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.9e-97 359.8 310 56.5
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 5.0e-89 332.4 343 52.8
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.8e-86 323.9 203 73.9
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 4.0e-70 269.6 208 60.1
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 4.0e-70 269.6 208 60.1
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 7.5e-69 265.4 276 47.1
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 7.5e-69 265.4 201 67.2
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.9e-64 250.8 276 44.6
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.2e-55 221.5 120 80.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 4.0e-46 189.9 252 42.9
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 7.5e-45 185.7 254 45.3
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 7.8e-42 175.6 111 74.8
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 7.5e-37 159.1 134 56.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.7e-36 156.8 132 58.3
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.4e-30 138.3 69 88.4
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 2.6e-29 134.0 78 74.4
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.2e-23 115.2 68 75.0
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 2.9e-20 104.0 73 63.0
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.1e-16 92.0 53 75.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 9.3e-11 72.4 62 53.2
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 6.0e-10 69.7 120 30.0
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.6e-08 62.4 59 44.1
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 4.8e-07 60.1 106 43.4
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.1e-06 58.9 117 39.3
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 4.0e-06 57.0 41 56.1


User provided reference genes

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