Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.7e-78 296.2 183 100.0
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 2.1e-55 219.5 172 82.6
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 2.9e-49 199.1 166 81.3
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.3e-41 173.7 139 72.7
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.4e-40 169.5 178 63.5
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 4.2e-40 168.7 137 70.1
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.6e-39 166.8 186 65.1
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 6.0e-39 164.9 113 79.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.3e-38 163.7 182 64.8
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 2.3e-38 162.9 186 65.1
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.3e-38 162.9 139 71.2
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 3.9e-38 162.2 133 69.9
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 5.1e-38 161.8 185 63.8
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.1e-37 160.6 123 76.4
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.1e-37 160.6 132 68.9
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.1e-37 160.6 132 68.9
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.9e-37 159.8 132 68.9
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 2.5e-37 159.5 132 68.9
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.3e-37 159.1 151 72.8
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 3.3e-37 159.1 106 82.1
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.3e-37 159.1 132 68.2
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.6e-37 158.3 151 72.8
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 5.6e-37 158.3 139 70.5
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.6e-36 156.8 147 72.1
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 2.8e-36 156.0 105 80.0
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.8e-36 156.0 102 81.4
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.8e-36 156.0 184 61.4
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 3.6e-36 155.6 136 66.2
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 3.6e-36 155.6 104 81.7
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 3.6e-36 155.6 104 81.7
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 4.8e-36 155.2 139 65.5
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.1e-35 154.1 139 67.6
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.4e-35 153.7 118 72.9
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.4e-35 153.7 133 67.7
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.4e-35 152.9 102 82.4
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 4.0e-35 152.1 136 67.6
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 4.0e-35 152.1 118 72.9
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 4.0e-35 152.1 118 72.0
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 5.3e-35 151.8 97 82.5
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 6.9e-35 151.4 166 67.5
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 6.9e-35 151.4 161 67.1
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 6.9e-35 151.4 131 67.2
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 6.9e-35 151.4 137 67.2
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 9.0e-35 151.0 137 63.5
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.2e-34 150.6 138 65.9
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.2e-34 150.6 138 65.2
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.5e-34 150.2 109 78.0
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 1.5e-34 150.2 105 78.1
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.5e-34 150.2 138 65.2
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 4.5e-34 148.7 126 69.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 7.6e-34 147.9 137 67.2
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 9.9e-34 147.5 139 65.5
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 9.9e-34 147.5 96 78.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.3e-33 147.1 135 67.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.9e-33 146.0 91 82.4
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 3.8e-33 145.6 133 64.7
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.8e-33 145.6 113 72.6
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.9e-33 145.2 130 66.2
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 4.9e-33 145.2 97 81.4
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.9e-33 145.2 91 83.5
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 8.4e-33 144.4 132 62.9
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 8.4e-33 144.4 133 63.9
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 8.4e-33 144.4 165 64.8
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.1e-32 144.1 138 60.1
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.4e-32 143.7 185 57.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.9e-32 143.3 111 72.1
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 7.1e-32 141.4 104 76.0
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 7.1e-32 141.4 133 60.9
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 9.3e-32 141.0 138 63.0
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.2e-31 140.6 109 72.5
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.6e-31 140.2 86 83.7
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.6e-31 140.2 86 83.7
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.6e-31 140.2 86 83.7
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.6e-31 140.2 86 83.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.6e-31 140.2 223 49.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 3.5e-31 139.0 141 64.5
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 4.6e-31 138.7 118 66.9
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.0e-31 138.3 137 62.0
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.0e-30 137.5 136 60.3
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 2.3e-30 136.3 133 56.4
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 3.9e-30 135.6 153 59.5
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 5.1e-30 135.2 133 60.9
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 5.1e-30 135.2 137 59.9
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 8.7e-30 134.4 153 60.1
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.5e-29 133.7 127 58.3
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.5e-29 133.7 105 71.4
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.9e-29 133.3 112 63.4
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.9e-29 133.3 114 63.2
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.9e-29 133.3 127 57.5
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.9e-29 133.3 127 57.5
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.9e-29 133.3 127 57.5
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 2.5e-29 132.9 121 65.3
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 4.3e-29 132.1 210 52.4
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 5.6e-29 131.7 111 68.5
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-28 130.2 91 72.5
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.6e-28 130.2 91 72.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 3.7e-28 129.0 127 61.4
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 3.7e-28 129.0 135 59.3
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 4.8e-28 128.6 127 70.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 6.2e-28 128.3 122 59.8
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 8.1e-28 127.9 143 57.3
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.8e-27 126.7 184 46.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.4e-27 126.3 129 58.1
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 2.4e-27 126.3 192 52.6
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 3.1e-27 125.9 131 58.0
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 5.3e-27 125.2 129 58.1
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 5.3e-27 125.2 116 61.2
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 1.5e-26 123.6 90 72.2
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 2.0e-26 123.2 76 82.9
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 4.5e-26 122.1 106 69.8
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 5.8e-26 121.7 76 81.6
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 7.6e-26 121.3 91 71.4
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 9.9e-26 120.9 103 67.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 4.2e-24 115.5 92 69.6
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.2e-23 114.0 69 84.1
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 4.6e-23 112.1 130 53.8
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 1.5e-21 107.1 101 62.4
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 9.6e-21 104.4 183 48.1
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 6.9e-19 98.2 81 66.7
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.9e-17 92.8 77 62.3
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.1e-16 90.9 259 32.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.1e-15 86.7 92 55.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.3e-14 84.0 94 52.1
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 1.3e-12 77.4 80 53.8
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.4e-11 73.9 89 68.5
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.8e-11 73.6 180 47.2
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 5.3e-11 72.0 80 56.2
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 4.5e-10 68.9 46 71.7
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 7.7e-10 68.2 96 47.9
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 4.6e-07 58.9 67 46.3
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 6.1e-07 58.5 53 56.6
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 3.9e-06 55.8 42 66.7


User provided reference genes

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