Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 2.8e-185 651.7 320 100.0
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 5.8e-106 388.3 409 52.6
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 4.4e-85 318.9 423 44.4
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 4.1e-83 312.4 419 43.9
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.6e-82 309.7 426 43.7
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 3.8e-81 305.8 419 42.7
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 6.5e-81 305.1 416 42.3
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 6.5e-81 305.1 421 43.0
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 6.5e-81 305.1 429 43.6
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.5e-80 303.1 424 43.9
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 3.6e-79 299.3 427 42.2
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 6.1e-79 298.5 423 42.3
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 2.3e-78 296.6 426 42.5
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 8.8e-78 294.7 433 42.0
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 1.5e-77 293.9 415 41.2
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.5e-77 293.9 420 42.1
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.5e-77 293.9 416 41.3
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 2.0e-77 293.5 418 43.5
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 2.6e-77 293.1 416 42.1
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 2.6e-77 293.1 417 42.4
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 5.7e-77 292.0 416 41.3
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 5.7e-77 292.0 418 43.3
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.7e-77 292.0 420 42.1
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 7.4e-77 291.6 415 41.9
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 7.4e-77 291.6 419 40.6
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 9.7e-77 291.2 422 41.5
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.7e-76 290.4 416 40.9
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 8.2e-76 288.1 422 41.7
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 8.2e-76 288.1 419 41.1
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.1e-75 287.7 411 39.9
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.4e-75 287.3 415 41.2
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.8e-75 287.0 419 42.2
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.8e-75 287.0 425 42.4
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.4e-75 286.6 417 42.0
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 4.1e-75 285.8 420 41.7
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.6e-74 283.9 418 41.1
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 3.5e-74 282.7 417 42.4
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 4.5e-74 282.3 418 40.9
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 4.5e-74 282.3 418 41.9
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.7e-73 280.4 535 36.1
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 3.8e-73 279.3 419 40.8
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 5.0e-73 278.9 474 38.0
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 6.5e-73 278.5 421 40.4
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.9e-72 276.9 420 40.2
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 2.5e-72 276.6 416 41.1
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 3.2e-72 276.2 419 40.1
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 3.2e-72 276.2 429 40.6
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 4.2e-72 275.8 418 40.9
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 7.2e-72 275.0 394 43.7
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 9.4e-72 274.6 419 40.3
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.2e-71 274.2 412 40.5
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 2.7e-71 273.1 419 40.6
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 4.7e-71 272.3 419 40.1
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 6.1e-71 271.9 418 39.7
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 2.3e-70 270.0 419 39.4
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 4.0e-70 269.2 420 40.5
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 8.8e-70 268.1 421 39.9
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.2e-69 267.7 419 40.3
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.6e-69 266.5 418 40.7
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.6e-69 266.5 419 41.1
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 4.4e-69 265.8 440 40.2
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.7e-69 265.4 418 40.2
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 5.7e-69 265.4 409 41.3
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.4e-67 260.8 417 40.5
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 1.4e-67 260.8 422 38.4
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 1.6e-66 257.3 407 40.5
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 5.9e-66 255.4 373 41.3
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 5.9e-66 255.4 402 40.0
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 1.7e-65 253.8 435 38.4
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 3.8e-65 252.7 425 37.2
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 1.2e-63 247.7 428 36.4
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 6.8e-62 241.9 218 56.9
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 8.8e-62 241.5 405 39.0
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.5e-61 240.7 409 39.1
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 5.7e-61 238.8 405 39.5
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.7e-61 238.8 450 34.7
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 2.8e-60 236.5 419 37.2
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 8.3e-60 235.0 417 37.2
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 1.6e-58 230.7 415 35.4
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 5.9e-58 228.8 429 37.8
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 7.7e-58 228.4 425 36.7
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.6e-55 220.7 418 37.8
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 2.1e-55 220.3 370 39.2
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 6.1e-55 218.8 431 35.3
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 8.0e-55 218.4 390 37.2
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 5.2e-54 215.7 378 38.4
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 9.8e-53 211.5 420 35.7
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 9.2e-51 204.9 315 39.0
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 4.5e-50 202.6 420 34.5
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 2.5e-48 196.8 217 45.6
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 2.5e-48 196.8 277 42.6
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 1.2e-47 194.5 417 32.9
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 3.6e-47 193.0 357 37.5
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 4.7e-47 192.6 478 30.1
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 4.4e-45 186.0 375 37.9
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 5.4e-43 179.1 358 36.6
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.2e-42 177.9 134 63.4
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 1.2e-42 177.9 458 30.8
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 3.0e-41 173.3 222 45.5
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 3.9e-41 172.9 423 31.9
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 8.6e-41 171.8 377 34.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 1.2e-37 161.4 410 32.2
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.2e-36 157.1 106 69.8
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 3.9e-33 146.4 376 31.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 7.1e-27 125.6 280 31.1
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.2e-26 124.8 274 32.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.9e-24 117.5 315 31.4
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.6e-23 114.4 72 72.2
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 1.6e-23 114.4 106 53.8
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 2.0e-21 107.5 154 40.9
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 8.4e-20 102.1 274 29.6
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 1.9e-19 100.9 111 46.8
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 5.8e-13 79.3 115 46.1
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 6.4e-12 75.9 39 87.2
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 1.9e-11 74.3 47 66.0
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.9e-11 74.3 38 86.8
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 3.5e-10 70.1 38 81.6
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 6.0e-10 69.3 96 35.4
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 7.3e-08 62.4 35 71.4
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.8e-06 57.8 35 68.6
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 3.1e-06 57.0 92 33.7


User provided reference genes

Program Settings