Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 2.1e-144 515.8 280 100.0
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 3.2e-47 193.0 181 57.5
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 1.9e-44 183.7 242 45.5
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.3e-29 134.4 191 44.0
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 5.8e-25 119.0 86 59.3
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 7.6e-25 118.6 171 43.9
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 2.9e-24 116.7 147 44.9
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 6.4e-24 115.5 113 49.6
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 1.9e-23 114.0 187 39.0
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 2.4e-23 113.6 120 46.7
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 3.2e-23 113.2 152 42.1
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 4.1e-23 112.8 90 57.8
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 9.2e-23 111.7 101 51.5
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 9.2e-23 111.7 183 39.3
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 9.2e-23 111.7 154 43.5
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 2.1e-22 110.5 128 43.0
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 2.1e-22 110.5 99 52.5
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 2.1e-22 110.5 139 42.4
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 2.7e-22 110.2 115 48.7
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 3.5e-22 109.8 172 36.6
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 4.6e-22 109.4 162 39.5
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 4.6e-22 109.4 163 43.6
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 4.6e-22 109.4 250 36.8
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 4.6e-22 109.4 141 41.1
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 6.0e-22 109.0 101 49.5
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 6.0e-22 109.0 127 44.9
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 7.8e-22 108.6 239 33.1
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 1.3e-21 107.8 137 38.7
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 1.7e-21 107.5 99 47.5
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 1.7e-21 107.5 99 47.5
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.7e-21 107.5 94 51.1
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 1.7e-21 107.5 226 32.3
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.3e-21 107.1 88 55.7
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 3.0e-21 106.7 154 43.5
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 3.9e-21 106.3 209 34.0
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 3.9e-21 106.3 154 42.2
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 5.1e-21 105.9 99 49.5
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 5.1e-21 105.9 217 36.9
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 8.6e-21 105.1 148 37.8
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.1e-20 104.8 102 49.0
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 1.1e-20 104.8 136 43.4
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 1.1e-20 104.8 168 41.1
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 1.5e-20 104.4 135 40.7
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 1.9e-20 104.0 93 50.5
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 1.9e-20 104.0 222 35.1
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 2.5e-20 103.6 218 33.5
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 2.5e-20 103.6 93 50.5
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 2.5e-20 103.6 119 43.7
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 3.3e-20 103.2 195 36.4
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 3.3e-20 103.2 89 52.8
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 3.3e-20 103.2 249 33.3
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 4.3e-20 102.8 109 44.0
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.2e-19 101.3 159 35.8
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 1.6e-19 100.9 120 41.7
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 2.1e-19 100.5 179 36.9
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 2.1e-19 100.5 179 36.9
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 2.8e-19 100.1 129 42.6
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 2.8e-19 100.1 95 47.4
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 3.6e-19 99.8 114 50.9
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 3.6e-19 99.8 90 51.1
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 4.7e-19 99.4 133 42.1
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 4.7e-19 99.4 136 42.6
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 4.7e-19 99.4 188 35.1
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 6.2e-19 99.0 87 54.0
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 8.1e-19 98.6 208 37.0
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 8.1e-19 98.6 116 42.2
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 1.1e-18 98.2 128 39.8
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 1.1e-18 98.2 159 37.7
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 1.1e-18 98.2 146 39.7
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 1.4e-18 97.8 126 38.1
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 1.8e-18 97.4 182 33.0
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 1.8e-18 97.4 250 32.4
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 3.1e-18 96.7 83 51.8
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 3.1e-18 96.7 200 33.0
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 3.1e-18 96.7 150 42.7
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 4.0e-18 96.3 131 37.4
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 5.2e-18 95.9 131 39.7
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 5.2e-18 95.9 89 51.7
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 8.9e-18 95.1 197 35.0
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 8.9e-18 95.1 156 36.5
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 1.5e-17 94.4 99 45.5
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 2.0e-17 94.0 101 44.6
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 4.4e-17 92.8 99 41.4
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 4.4e-17 92.8 214 31.3
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 7.6e-17 92.0 183 32.2
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 7.6e-17 92.0 74 52.7
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 9.9e-17 91.7 156 35.3
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 1.3e-16 91.3 119 40.3
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 1.3e-16 91.3 216 31.5
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.3e-16 91.3 84 51.2
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 1.7e-16 90.9 170 34.7
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 2.9e-16 90.1 135 40.0
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 3.8e-16 89.7 211 30.3
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 4.9e-16 89.4 102 42.2
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 6.4e-16 89.0 162 36.4
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.4e-15 87.8 231 29.9
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 1.9e-15 87.4 188 33.5
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 3.2e-15 86.7 90 48.9
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 7.1e-15 85.5 97 45.4
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.7e-14 83.6 71 57.7
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 3.5e-14 83.2 164 34.1
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 4.6e-14 82.8 187 31.0
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 4.6e-14 82.8 94 39.4
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 1.0e-13 81.6 85 43.5
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 1.3e-13 81.3 121 37.2
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 1.3e-13 81.3 121 37.2
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 1.7e-13 80.9 218 29.4
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 8.7e-13 78.6 180 32.2
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 1.1e-12 78.2 177 32.8
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 1.1e-12 78.2 92 47.8
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.1e-12 78.2 133 32.3
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 1.5e-12 77.8 67 56.7
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 1.9e-12 77.4 94 41.5
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 2.5e-12 77.0 180 31.7
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 2.5e-12 77.0 83 44.6
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 2.5e-12 77.0 153 34.0
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 2.8e-11 73.6 57 54.4
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 1.8e-10 70.9 110 36.4
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 5.3e-10 69.3 76 44.7
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 5.8e-09 65.9 106 34.0
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 9.9e-09 65.1 44 59.1
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.4e-07 61.2 83 39.8
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 2.4e-07 60.5 48 50.0


User provided reference genes

Program Settings