Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 2.8e-293 1011.1 484 100.0
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 4.8e-253 877.5 474 87.8
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 3.8e-250 867.8 473 86.9
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 7.7e-235 817.0 477 80.7
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 3.6e-232 808.1 484 78.7
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.0e-231 806.6 484 78.5
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.0e-231 806.6 474 79.7
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 3.0e-231 805.1 473 79.5
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.7e-229 798.1 479 78.1
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 6.3e-229 797.3 479 77.5
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 3.5e-227 791.6 478 78.0
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 4.5e-227 791.2 474 78.3
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 4.5e-227 791.2 475 78.5
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 7.7e-227 790.4 473 78.9
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.5e-225 786.2 474 78.1
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.2e-224 783.1 474 77.0
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 1.2e-224 783.1 474 76.6
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 1.2e-224 783.1 474 76.8
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.7e-224 781.9 474 77.2
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.7e-224 781.2 473 76.5
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.7e-224 781.2 473 76.5
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 1.0e-223 780.0 473 76.5
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.0e-223 780.0 480 76.9
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.4e-223 779.6 478 76.6
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 2.3e-223 778.9 474 76.8
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.0e-223 778.5 477 78.0
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 4.0e-223 778.1 474 76.8
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 4.0e-223 778.1 473 75.9
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 4.0e-223 778.1 474 76.2
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 6.8e-223 777.3 475 77.5
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.2e-222 776.5 474 76.8
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 1.2e-222 776.5 474 76.6
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 7.5e-222 773.9 474 75.9
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.2e-221 772.3 475 77.5
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 2.8e-221 771.9 477 77.1
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 3.7e-221 771.5 510 72.2
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.8e-221 771.2 474 76.6
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 8.3e-221 770.4 477 76.5
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 1.1e-220 770.0 474 76.6
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.1e-220 770.0 478 76.4
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.4e-220 768.8 491 73.5
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.1e-220 768.5 474 77.6
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.1e-220 768.1 474 75.5
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.4e-220 767.7 475 77.3
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 1.2e-219 766.5 478 76.2
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 4.5e-219 764.6 476 75.6
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.3e-218 763.1 476 76.5
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.3e-218 763.1 473 75.3
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.7e-218 762.7 474 75.9
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 6.5e-218 760.8 473 75.9
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 6.5e-218 760.8 474 75.7
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 8.6e-218 760.4 474 75.5
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 1.1e-217 760.0 474 76.4
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.9e-217 759.2 474 74.5
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.5e-217 757.7 474 75.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 7.2e-217 757.3 473 74.4
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 9.5e-217 756.9 476 75.4
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 9.5e-217 756.9 560 66.8
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 4.7e-216 754.6 474 75.1
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.0e-215 751.5 488 73.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 4.0e-215 751.5 502 73.1
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 5.2e-215 751.1 473 74.4
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 5.7e-214 747.7 473 73.4
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 5.7e-214 747.7 474 74.3
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 5.7e-214 747.7 476 74.4
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 9.8e-214 746.9 473 74.2
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.3e-213 746.5 447 76.3
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 2.8e-213 745.3 475 73.9
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 4.9e-213 744.6 479 74.1
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 1.1e-212 743.4 473 74.4
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 3.1e-212 741.9 568 64.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 7.0e-212 740.7 476 73.9
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 3.5e-211 738.4 477 73.6
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.5e-211 738.0 447 76.5
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 2.9e-210 735.3 473 72.3
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 8.6e-210 733.8 473 72.1
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 8.6e-210 733.8 473 72.5
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 9.5e-209 730.3 473 72.7
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 9.5e-209 730.3 473 72.5
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-208 729.9 473 71.7
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-208 729.9 473 71.7
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 1.2e-208 729.9 474 72.4
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 2.8e-208 728.8 474 73.0
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.6e-208 728.4 446 76.0
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 3.6e-208 728.4 558 64.5
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 1.0e-207 726.9 474 71.9
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 3.0e-207 725.3 473 71.2
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 8.9e-207 723.8 473 71.5
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 3.4e-206 721.8 473 71.5
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.7e-205 719.5 473 70.6
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 2.2e-205 719.2 473 70.8
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.2e-205 719.2 473 71.9
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.1e-204 716.8 477 71.5
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 7.0e-204 714.1 412 80.6
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.0e-202 710.3 497 68.0
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 2.3e-202 709.1 473 73.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 7.3e-201 704.1 476 68.7
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 2.1e-200 702.6 412 79.9
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 4.7e-200 701.4 531 65.9
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.8e-199 699.5 562 61.7
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.4e-196 689.9 587 59.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 8.6e-194 680.6 482 67.8
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 4.0e-191 671.8 497 66.0
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.2e-188 662.1 441 72.3
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 7.1e-188 661.0 474 66.7
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 4.0e-183 645.2 411 72.7
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.6e-176 622.1 374 76.7
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.2e-174 617.1 420 68.6
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.4e-172 609.4 477 61.0
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 1.6e-171 606.7 364 78.3
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.3e-170 603.6 485 58.1
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 1.1e-169 600.5 479 61.0
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.8e-167 593.2 362 73.5
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.4e-166 589.0 362 73.2
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 6.2e-160 568.2 331 80.1
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 6.2e-160 568.2 327 81.0
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 4.5e-158 562.0 327 80.7
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.5e-158 562.0 328 80.5
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.5e-153 547.0 468 54.7
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 1.6e-147 526.9 328 77.1
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 3.5e-147 525.8 324 76.9
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 3.5e-147 525.8 333 75.7
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 1.5e-145 520.4 361 69.3
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 3.2e-140 502.7 355 69.3
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.9e-132 476.9 327 71.3
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-129 465.3 289 74.4
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.3e-104 381.7 222 77.0
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 2.3e-101 373.6 387 47.3
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 4.9e-96 355.9 490 39.2
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.9e-92 344.0 212 78.8
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 1.7e-88 330.9 420 43.3
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 1.2e-81 308.1 221 65.2
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-76 291.6 159 83.0
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-76 291.6 159 83.0
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.5e-76 291.2 188 76.1
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.2e-74 282.7 159 81.8
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 2.8e-67 260.4 145 81.4
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 5.6e-60 236.1 421 34.2
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.0e-45 188.7 106 83.0
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.3e-44 183.3 106 79.2
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.0e-42 176.8 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.5e-41 174.9 93 87.1
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 7.9e-38 162.5 119 66.4
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 6.2e-35 152.9 131 55.7
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 6.2e-35 152.9 91 73.6
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 9.4e-23 112.5 67 71.6
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 9.7e-20 102.4 76 67.1
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.4e-18 97.8 65 61.5
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.0e-16 92.4 70 65.7
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.6e-14 85.1 70 61.4
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 1.0e-13 82.4 74 56.8
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 1.3e-08 65.5 34 76.5
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 6.5e-08 63.2 130 34.6


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