Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 0.0e+00 1086.6 611 100.0
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.0e-248 862.4 615 75.0
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 4.7e-213 745.0 618 67.6
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.9e-207 725.7 620 66.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.6e-203 712.6 622 62.1
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 4.4e-203 711.8 630 62.1
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.2e-201 705.7 612 62.4
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 1.7e-199 699.9 613 61.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.6e-198 694.9 606 67.3
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 2.1e-197 693.0 612 61.6
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 6.2e-197 691.4 635 59.8
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 5.2e-196 688.3 607 60.0
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.4e-193 680.2 611 62.8
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 3.5e-192 675.6 617 62.6
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.5e-192 675.6 618 62.3
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.5e-190 670.2 618 62.3
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.6e-189 666.8 614 63.7
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 6.2e-189 664.8 618 62.0
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.4e-188 663.7 619 62.4
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 6.8e-188 661.4 621 60.1
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 8.9e-188 661.0 626 59.9
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 3.4e-187 659.1 610 58.7
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 5.8e-187 658.3 616 59.7
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 7.5e-187 657.9 614 56.8
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.3e-186 657.1 619 60.6
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.7e-186 655.6 619 62.7
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.1e-185 654.1 593 62.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.9e-185 653.3 625 58.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 4.1e-185 652.1 610 62.6
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 5.4e-185 651.7 618 61.2
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 7.1e-185 651.4 618 58.3
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 7.1e-185 651.4 616 61.9
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 2.1e-184 649.8 620 62.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 4.6e-184 648.7 625 56.3
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.8e-184 647.9 615 56.7
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 3.0e-183 646.0 611 60.2
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.9e-183 645.6 611 59.4
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 5.1e-183 645.2 611 59.6
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 5.1e-183 645.2 606 58.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.1e-182 644.0 615 56.4
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.1e-182 644.0 616 56.8
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.5e-182 643.7 609 56.7
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.5e-182 641.0 592 59.3
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 2.8e-181 639.4 551 60.3
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.4e-180 637.1 611 57.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 6.8e-180 634.8 605 59.2
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.2e-179 634.0 608 58.1
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.2e-179 634.0 609 55.8
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.2e-179 634.0 628 55.1
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.5e-179 633.6 620 59.7
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.0e-179 633.3 623 57.8
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.4e-179 632.5 616 55.8
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 4.4e-179 632.1 608 57.4
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 5.8e-179 631.7 609 58.3
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.7e-178 630.2 612 58.2
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.2e-176 624.0 625 54.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.6e-176 623.6 613 59.2
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.1e-176 623.2 558 59.9
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.6e-176 622.1 436 73.4
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 6.0e-176 621.7 628 58.8
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.3e-175 619.8 547 60.7
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.0e-175 619.4 622 57.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 3.9e-175 619.0 628 56.1
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 6.6e-175 618.2 632 58.7
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.1e-174 617.5 622 56.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.1e-174 617.5 640 53.6
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.5e-174 617.1 623 54.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.9e-174 616.7 641 55.1
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 3.3e-174 615.9 584 57.5
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 4.3e-174 615.5 623 58.3
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 5.6e-174 615.1 588 56.1
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 7.3e-174 614.8 623 55.4
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.6e-173 613.6 506 67.0
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 3.6e-173 612.5 623 54.6
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 3.6e-173 612.5 623 54.6
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 8.1e-173 611.3 623 54.7
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 4.0e-172 609.0 630 57.0
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 4.0e-172 609.0 639 53.7
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 5.2e-172 608.6 617 53.5
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.2e-171 607.4 634 58.0
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.5e-171 607.1 614 56.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.9e-169 600.1 627 55.5
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.7e-167 593.6 561 56.9
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 3.3e-166 589.3 593 59.0
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 4.3e-166 589.0 613 53.5
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.3e-165 587.4 614 56.2
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.1e-164 584.3 626 52.9
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 5.3e-164 582.0 593 56.5
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 7.1e-161 571.6 551 59.9
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.0e-156 555.8 624 51.1
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 4.0e-156 555.8 488 59.0
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.3e-151 540.8 546 59.2
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.2e-146 523.5 622 51.8
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.5e-145 520.0 578 48.3
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 5.5e-137 492.3 429 58.0
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 2.7e-136 490.0 351 63.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 2.0e-131 473.8 546 48.0
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.8e-127 460.7 550 48.4
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.3e-125 454.5 634 43.2
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.2e-122 443.7 426 63.1
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.1e-88 330.9 343 56.0
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 1.2e-86 325.1 344 55.2
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.9e-77 293.9 482 35.5
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 3.1e-47 194.1 284 38.0
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 4.0e-47 193.7 271 38.4
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.0e-46 191.4 249 40.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.8e-46 189.9 249 40.6
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 3.9e-42 177.2 282 34.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.5e-33 147.9 134 56.7
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.7e-33 146.7 91 73.6
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 2.5e-25 121.3 83 69.9
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.9e-20 105.1 61 70.5
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.2e-20 104.4 68 70.6
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.0e-18 99.4 62 77.4
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 1.0e-18 99.4 162 32.1
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.4e-15 88.2 80 61.2
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.0e-13 82.8 45 80.0


User provided reference genes

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