Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.1e-122 443.4 232 100.0
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 6.2e-73 278.1 234 70.1
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.2e-68 263.8 201 73.6
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 1.2e-63 247.3 225 61.3
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 9.9e-63 244.2 225 60.9
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 7.1e-61 238.0 186 68.3
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 2.3e-59 233.0 196 60.7
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 3.9e-59 232.3 225 58.7
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 2.5e-58 229.6 234 56.8
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.1e-57 226.5 236 55.5
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 4.7e-57 225.3 236 55.1
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 2.4e-56 223.0 229 56.3
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 3.1e-56 222.6 229 53.3
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 6.9e-56 221.5 227 57.3
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 1.5e-55 220.3 229 56.3
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 5.8e-55 218.4 227 52.9
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 9.9e-55 217.6 198 58.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.3e-54 217.2 227 55.1
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 2.2e-54 216.5 232 55.6
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 4.9e-54 215.3 194 59.3
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 8.4e-54 214.5 233 53.6
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.1e-53 214.2 190 58.4
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.4e-53 213.8 228 53.5
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 5.4e-53 211.8 226 52.7
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.6e-52 210.3 190 56.3
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.7e-52 209.5 224 52.2
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.5e-52 209.1 233 52.8
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.0e-51 207.6 184 56.5
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 1.0e-51 207.6 229 53.3
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.0e-51 207.6 230 53.0
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 3.0e-51 206.1 232 52.6
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 3.9e-51 205.7 155 67.1
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 3.9e-51 205.7 194 56.7
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 6.6e-51 204.9 195 60.0
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 8.7e-51 204.5 228 53.1
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.1e-50 204.1 228 53.1
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.9e-50 203.4 229 53.3
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 2.5e-50 203.0 232 51.7
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.5e-50 203.0 184 56.5
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 3.3e-50 202.6 214 51.9
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 3.3e-50 202.6 178 57.9
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 3.3e-50 202.6 228 53.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 4.3e-50 202.2 178 57.3
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 5.6e-50 201.8 232 52.2
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 7.3e-50 201.4 232 49.6
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 9.6e-50 201.1 178 57.9
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 9.6e-50 201.1 178 58.4
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 9.6e-50 201.1 178 58.4
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 9.6e-50 201.1 178 58.4
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 9.6e-50 201.1 223 54.3
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.6e-49 200.3 186 55.9
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 2.1e-49 199.9 222 49.1
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 2.8e-49 199.5 181 55.2
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 2.8e-49 199.5 178 57.9
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.6e-49 199.1 158 62.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 3.6e-49 199.1 227 50.2
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 3.6e-49 199.1 178 56.7
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 6.2e-49 198.4 178 57.9
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 8.1e-49 198.0 146 65.1
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 8.1e-49 198.0 199 53.3
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.1e-48 197.6 147 68.7
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 3.1e-48 196.1 219 51.1
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 3.1e-48 196.1 195 52.8
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 6.9e-48 194.9 231 51.5
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.9e-48 194.9 251 48.2
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 9.0e-48 194.5 223 47.1
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.2e-47 194.1 154 60.4
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 2.6e-47 193.0 227 51.1
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 7.6e-47 191.4 193 51.3
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 7.6e-47 191.4 220 49.1
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 9.9e-47 191.0 305 41.6
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 1.7e-46 190.3 175 56.0
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 4.9e-46 188.7 225 48.9
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 6.4e-46 188.3 175 55.4
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 6.4e-46 188.3 227 48.0
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.9e-45 186.8 225 49.8
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 5.4e-45 185.3 172 57.0
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.6e-44 183.7 161 60.9
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 4.6e-44 182.2 130 66.9
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 2.3e-43 179.9 148 62.2
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.9e-42 176.8 233 45.9
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 2.5e-42 176.4 222 45.0
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 3.3e-42 176.0 179 53.1
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 2.8e-41 172.9 199 52.3
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 4.8e-41 172.2 179 52.0
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.5e-39 167.2 228 44.7
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 2.6e-39 166.4 130 62.3
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 7.6e-39 164.9 199 53.3
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.2e-37 159.5 237 43.5
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 7.1e-37 158.3 153 54.9
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 3.5e-36 156.0 155 50.3
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 7.9e-36 154.8 228 43.0
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 2.9e-22 109.8 92 63.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 6.5e-22 108.6 184 38.6
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 8.5e-22 108.2 198 40.9
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 2.4e-16 90.1 206 32.5
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 5.3e-16 89.0 158 36.7
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 2.6e-15 86.7 147 34.0
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 3.3e-10 69.7 68 50.0
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 1.5e-07 60.8 114 37.7


User provided reference genes

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