Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1448 Erigeron canadensis HOM05D015542 ORTHO05D009940 1.2e-94 349.7 168 100.0
ECA240G2701 Erigeron canadensis HOM05D015542 ORTHO05D009940 2.5e-92 342.0 163 100.0
ECA247G1430 Erigeron canadensis HOM05D015542 ORTHO05D004158 2.3e-29 132.9 76 88.2
ECA246G3605 Erigeron canadensis HOM05D015542 ORTHO05D004158 3.4e-28 129.0 110 68.2
ECA247G2360 Erigeron canadensis HOM05D015542 ORTHO05D004158 4.4e-28 128.6 110 67.3
ECA233G4516 Erigeron canadensis HOM05D015542 ORTHO05D004158 7.5e-28 127.9 110 67.3
ECA246G0722 Erigeron canadensis HOM05D000214 ORTHO05D000131 9.8e-28 127.5 119 63.0
ECA234G2316 Erigeron canadensis HOM05D005282 ORTHO05D002071 8.3e-27 124.4 75 82.7
ECA248G2783 Erigeron canadensis HOM05D003789 ORTHO05D004158 2.4e-26 122.9 110 64.5
ECA240G2288 Erigeron canadensis HOM05D000006 ORTHO05D001423 6.5e-24 114.8 73 78.1
ECA238G0146 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.6e-15 85.1 58 70.7
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.6e-15 85.1 38 100.0
ECA240G0947 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.2e-14 84.0 38 97.4
ECA247G3391 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.2e-14 84.0 38 97.4
ECA240G2379 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.7e-14 82.0 38 97.4
ECA238G1387 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.0e-13 79.3 38 92.1
ECA234G4595 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.2e-13 78.6 38 92.1
ECA236G2762 Erigeron canadensis HOM05D000045 ORTHO05D000067 6.4e-11 71.6 38 86.8
Atru.chr2.3305 Acer truncatum HOM05D000045 ORTHO05D002701 1.2e-09 67.4 38 68.4
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 4.6e-09 65.5 38 71.1
ECA240G3213 Erigeron canadensis HOM05D015542 ORTHO05D009940 7.8e-09 64.7 69 49.3
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.7e-08 63.5 37 64.9
CiPaw.10G145800 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.0e-08 62.0 39 64.1
TAR540G0001 Trochodendron aralioides HOM05D000045 ORTHO05D000067 5.0e-08 62.0 37 67.6
Atru.chr11.228 Acer truncatum HOM05D000045 ORTHO05D000067 6.6e-08 61.6 39 64.1
Atru.chr8.388 Acer truncatum HOM05D000045 ORTHO05D000067 6.6e-08 61.6 39 64.1
Aqoxy7G01999 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 6.6e-08 61.6 37 64.9
CiPaw.01G071100 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.6e-08 61.6 39 64.1
CiPaw.03G259700 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.6e-08 61.6 39 64.1
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 6.6e-08 61.6 38 68.4
CiPaw.03G222600 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.6e-08 61.2 39 61.5
CiPaw.15G062800 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.6e-08 61.2 39 61.5
Atru.chr2.2016 Acer truncatum HOM05D000045 ORTHO05D000067 1.5e-07 60.5 42 54.8
CiPaw.05G188500 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.5e-07 60.5 39 64.1
TPR.G32734 Trifolium pratense HOM05D000045 ORTHO05D000067 1.9e-07 60.1 41 56.1
CiPaw.01G140000 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-07 59.7 39 61.5
CiPaw.05G186800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 63.2
CiPaw.07G176900 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 63.2
CiPaw.15G163100 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-07 59.7 39 61.5
CiPaw.16G049800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 63.2
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 60.5
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 60.5
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 2.5e-07 59.7 38 63.2
Atru.ctg1152.6 Acer truncatum HOM05D000045 ORTHO05D000067 3.3e-07 59.3 39 61.5
CiPaw.02G091900 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.3e-07 59.3 38 63.2
CiPaw.04G062400 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.3e-07 59.3 38 63.2
SGA_v2.0_scaffold2874G54232 Striga asiatica HOM05D000045 ORTHO05D002701 3.3e-07 59.3 38 57.9
TPR.G14927 Trifolium pratense HOM05D000045 ORTHO05D000067 3.3e-07 59.3 38 63.2
TAR371G0903 Trochodendron aralioides HOM05D000045 ORTHO05D000067 4.3e-07 58.9 38 60.5
CANSAT56G2885 Cannabis sativa HOM05D000045 ORTHO05D000067 5.6e-07 58.5 36 66.7
CANSAT78G1934 Cannabis sativa HOM05D000045 ORTHO05D000067 5.6e-07 58.5 36 66.7
CiPaw.11G070100 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.6e-07 58.5 39 61.5
ECA240G2928 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.6e-07 58.5 82 47.6
TAR035G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 5.6e-07 58.5 38 60.5
CiPaw.01G219800 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.3e-07 58.2 38 63.2
CiPaw.01G228200 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.3e-07 58.2 38 60.5
CiPaw.15G141000 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.3e-07 58.2 38 63.2
CiPaw.16G119700 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.3e-07 58.2 38 60.5
Lj7C67T4 Lonicera japonica HOM05D000045 ORTHO05D000067 7.3e-07 58.2 36 66.7
SGA_v2.0_scaffold68G22942 Striga asiatica HOM05D000045 ORTHO05D002701 7.3e-07 58.2 38 60.5
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 9.5e-07 57.8 37 62.2
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.2e-06 57.4 51 51.0
SGA_v2.0_scaffold157G37343 Striga asiatica HOM05D000045 ORTHO05D002701 1.2e-06 57.4 38 63.2
SGA_v2.0_scaffold240G44111 Striga asiatica HOM05D000045 ORTHO05D002701 1.2e-06 57.4 38 63.2
CiPaw.15G043900 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-06 56.6 38 60.5
TPR.G21972 Trifolium pratense HOM05D000045 ORTHO05D000067 2.1e-06 56.6 38 60.5
CiPaw.04G006000 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.8e-06 56.2 38 60.5
CiPaw.06G017700 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.8e-06 56.2 38 57.9
CiPaw.05G024400 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.6e-06 55.8 38 60.5
ECA232G1086 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.6e-06 55.8 38 57.9
SGA_v2.0_scaffold29G12201 Striga asiatica HOM05D000045 ORTHO05D002701 3.6e-06 55.8 41 58.5
Os11g0681300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 4.7e-06 55.5 39 53.8
CiPaw.06G047200 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.0e-06 54.7 38 57.9
TWI09G0930 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.0e-06 54.7 38 55.3
TWI73G0003 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.0e-06 54.7 38 55.3


User provided reference genes

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