Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 7.6e-101 370.5 192 100.0
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 4.2e-67 258.5 199 70.9
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 2.2e-63 246.1 197 70.6
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 8.5e-52 207.6 200 57.0
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.9e-51 206.5 203 55.7
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 5.5e-51 204.9 192 63.0
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 2.1e-50 203.0 204 56.9
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.1e-48 197.2 124 82.3
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 1.5e-48 196.8 194 59.8
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 4.4e-48 195.3 205 53.2
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 5.7e-48 194.9 200 53.5
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 7.4e-48 194.5 124 73.4
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 9.7e-48 194.1 208 54.3
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 9.7e-48 194.1 157 68.2
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.7e-47 193.4 200 56.0
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 2.2e-47 193.0 213 49.8
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 2.8e-47 192.6 199 55.3
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 2.8e-47 192.6 202 57.9
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 6.3e-47 191.4 202 52.5
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.1e-46 190.7 189 58.7
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.1e-46 190.7 204 56.9
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 1.4e-46 190.3 127 76.4
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 1.8e-46 189.9 170 58.2
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 2.4e-46 189.5 202 55.9
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 3.1e-46 189.1 221 56.1
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 3.1e-46 189.1 195 54.4
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 7.0e-46 188.0 193 54.9
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 2.0e-45 186.4 116 81.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.6e-45 186.0 119 70.6
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.6e-45 186.0 198 52.5
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 3.4e-45 185.7 213 53.1
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 3.4e-45 185.7 207 57.5
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 5.9e-45 184.9 210 55.7
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 7.7e-45 184.5 204 52.0
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.0e-44 184.1 210 51.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 1.7e-44 183.3 201 52.2
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 1.7e-44 183.3 196 53.1
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 2.2e-44 183.0 197 56.9
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.2e-44 183.0 205 51.2
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 3.8e-44 182.2 205 51.2
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 3.8e-44 182.2 202 52.0
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 5.0e-44 181.8 191 52.9
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 8.5e-44 181.0 216 53.7
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 1.4e-43 180.3 136 64.7
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 1.4e-43 180.3 136 64.7
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 2.5e-43 179.5 191 55.0
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 4.2e-43 178.7 206 51.5
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 7.2e-43 177.9 125 76.8
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 9.4e-43 177.6 194 49.5
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 9.4e-43 177.6 197 52.3
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 4.7e-42 175.3 119 67.2
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 6.1e-42 174.9 123 73.2
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 6.1e-42 174.9 191 52.4
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 8.0e-42 174.5 121 73.6
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 1.0e-41 174.1 159 62.9
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.4e-41 173.7 236 45.8
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.3e-41 172.9 197 51.3
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.3e-41 172.9 197 51.3
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 5.2e-41 171.8 190 52.1
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 8.8e-41 171.0 196 50.5
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.1e-40 170.6 198 50.0
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.1e-40 170.6 198 55.1
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.1e-40 170.6 189 52.4
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.1e-40 170.6 121 72.7
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 1.5e-40 170.2 187 50.8
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.5e-40 170.2 121 72.7
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 2.0e-40 169.9 187 50.8
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 4.4e-40 168.7 198 49.0
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 5.7e-40 168.3 190 51.6
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 9.7e-40 167.5 195 52.8
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.3e-39 167.2 187 54.5
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 1.3e-39 167.2 161 60.9
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 1.7e-39 166.8 190 50.5
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 1.7e-39 166.8 167 55.1
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 2.8e-39 166.0 164 54.9
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 1.4e-38 163.7 188 50.0
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 1.8e-38 163.3 188 50.0
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 4.1e-38 162.2 162 54.9
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 4.1e-38 162.2 169 58.6
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 7.0e-38 161.4 162 54.9
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 7.0e-38 161.4 185 53.0
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.2e-37 160.6 162 54.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 2.6e-37 159.5 134 57.5
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 3.5e-37 159.1 172 54.7
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 5.9e-37 158.3 96 72.9
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 2.2e-36 156.4 100 69.0
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 2.9e-36 156.0 87 80.5
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 6.5e-36 154.8 176 51.1
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.2e-35 152.5 104 69.2
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 7.2e-35 151.4 171 48.5
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 2.7e-34 149.4 111 57.7
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 8.0e-34 147.9 87 71.3
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.2e-33 145.2 146 54.1
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.7e-33 144.8 154 55.2
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 3.3e-32 142.5 129 55.0
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 1.8e-30 136.7 106 67.9
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.8e-30 136.7 113 54.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 2.4e-30 136.3 138 55.1
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 8.5e-28 127.9 77 72.7
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 9.8e-24 114.4 174 41.4
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 8.3e-23 111.3 130 53.1
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 3.1e-22 109.4 94 56.4
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 7.0e-22 108.2 107 50.5
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.6e-21 107.1 114 41.2
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 2.9e-20 102.8 129 49.6
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 8.6e-20 101.3 76 57.9
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.1e-19 100.9 206 38.8
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.5e-19 100.5 105 46.7
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.5e-19 99.8 81 66.7
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 9.8e-16 87.8 139 43.9
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.7e-15 87.0 74 56.8
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 6.3e-15 85.1 168 35.7
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 5.9e-13 78.6 137 41.6
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.9e-12 76.3 126 39.7


User provided reference genes

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