Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.9e-80 301.2 167 100.0
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 2.6e-33 146.0 175 52.6
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.7e-24 116.7 171 48.0
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 4.4e-20 102.1 171 43.9
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 3.8e-16 89.0 192 38.5
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 3.2e-15 85.9 189 38.6
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 3.2e-15 85.9 134 47.0
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 4.2e-15 85.5 127 44.9
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 5.5e-15 85.1 174 41.4
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 7.2e-15 84.7 186 40.3
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 7.2e-15 84.7 137 42.3
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 1.6e-14 83.6 138 43.5
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 8.0e-14 81.3 135 44.4
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.8e-13 80.1 129 45.0
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 3.0e-13 79.3 138 45.7
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 4.0e-13 79.0 194 36.6
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 6.7e-13 78.2 195 36.9
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 6.7e-13 78.2 148 37.8
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 6.7e-13 78.2 128 47.7
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.2e-12 77.4 181 38.7
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.5e-12 77.0 124 49.2
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.5e-12 77.0 136 43.4
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 2.0e-12 76.6 135 43.7
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.0e-12 76.6 145 40.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 3.3e-12 75.9 180 37.8
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 3.3e-12 75.9 145 40.0
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 9.7e-12 74.3 175 37.1
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.7e-11 73.6 185 37.3
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 3.7e-11 72.4 181 36.5
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 3.7e-11 72.4 133 39.8
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 3.7e-11 72.4 133 39.8
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.7e-11 72.4 47 66.0
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 4.8e-11 72.0 145 38.6
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 6.3e-11 71.6 147 35.4
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 6.3e-11 71.6 119 45.4
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.8e-10 70.1 175 34.3
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.8e-10 70.1 139 36.0
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 2.4e-10 69.7 175 41.1
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 3.1e-10 69.3 182 37.4
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 5.3e-10 68.6 169 38.5
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 5.3e-10 68.6 128 43.8
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 7.0e-10 68.2 140 39.3
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 7.0e-10 68.2 46 63.0
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 7.0e-10 68.2 128 40.6
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 9.1e-10 67.8 136 37.5
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 9.1e-10 67.8 199 33.2
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 1.2e-09 67.4 137 41.6
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 1.2e-09 67.4 194 35.6
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 2.0e-09 66.6 133 36.1
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 2.0e-09 66.6 135 37.8
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 3.5e-09 65.9 133 37.6
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 3.5e-09 65.9 137 37.2
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 3.5e-09 65.9 135 37.8
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 7.7e-09 64.7 144 39.6
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.0e-08 64.3 122 39.3
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.0e-08 64.3 179 33.5
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.3e-08 63.9 185 32.4
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 1.3e-08 63.9 46 60.9
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.3e-08 63.9 46 60.9
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.3e-08 63.9 46 60.9
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.3e-08 63.9 46 60.9
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.3e-08 63.9 46 60.9
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 1.3e-08 63.9 139 37.4
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 1.7e-08 63.5 133 36.8
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.7e-08 63.5 185 32.4
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 2.2e-08 63.2 130 36.2
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 2.2e-08 63.2 161 32.3
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 2.2e-08 63.2 133 39.8
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 2.9e-08 62.8 177 31.6
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 3.8e-08 62.4 108 41.7
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 5.0e-08 62.0 193 31.1
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.1e-07 60.8 122 39.3
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 1.5e-07 60.5 130 38.5
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.5e-07 60.5 135 36.3
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 2.5e-07 59.7 192 33.3
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 3.2e-07 59.3 47 51.1
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 3.2e-07 59.3 142 37.3
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 5.5e-07 58.5 141 36.9
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 9.4e-07 57.8 178 31.5
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 1.2e-06 57.4 127 41.7
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 1.6e-06 57.0 139 37.4
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 1.6e-06 57.0 48 50.0
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 1.6e-06 57.0 169 36.1
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 2.1e-06 56.6 190 30.5
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.1e-06 56.6 45 57.8
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 2.1e-06 56.6 45 57.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 2.7e-06 56.2 136 36.0
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 2.7e-06 56.2 113 39.8
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 3.6e-06 55.8 186 29.0


User provided reference genes

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