Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 0.0e+00 1348.6 666 100.0
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 7.1e-239 830.9 665 66.5
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.2e-238 830.1 665 66.6
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.1e-231 807.0 666 65.2
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.6e-230 803.1 664 62.5
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 3.9e-229 798.5 664 63.9
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 3.9e-229 798.5 668 64.2
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.1e-226 790.4 665 62.0
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.4e-226 789.3 670 62.5
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.8e-221 773.1 673 62.1
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 2.3e-221 772.7 663 62.9
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 1.5e-217 760.0 681 59.3
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.6e-217 759.2 671 60.7
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 3.4e-217 758.8 666 61.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 4.5e-217 758.4 667 61.3
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.1e-215 753.8 667 60.4
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 2.7e-214 749.2 582 66.5
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 4.6e-214 748.4 668 59.6
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.3e-213 746.9 637 61.9
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.3e-213 746.9 661 60.4
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 6.7e-213 744.6 680 59.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 4.3e-212 741.9 667 59.8
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 5.7e-212 741.5 663 59.7
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 9.6e-212 740.7 663 60.3
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 8.2e-211 737.6 664 59.3
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 3.1e-210 735.7 662 58.6
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.1e-210 735.7 673 59.3
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 4.1e-210 735.3 669 58.4
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 5.3e-210 734.9 673 59.3
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.2e-209 733.8 672 59.8
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 3.4e-209 732.3 669 58.7
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 4.5e-209 731.9 664 59.3
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 4.5e-209 731.9 672 59.7
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 2.2e-208 729.6 663 57.9
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.9e-208 729.2 673 59.6
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 3.8e-208 728.8 669 58.4
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 6.5e-208 728.0 671 59.2
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.4e-207 726.9 674 59.3
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.4e-207 726.9 667 58.9
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 4.2e-207 725.3 667 58.9
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 1.2e-206 723.8 665 60.2
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.2e-206 723.8 682 58.8
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 2.3e-205 719.5 663 58.4
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.5e-204 716.8 680 57.5
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 7.4e-204 714.5 659 58.3
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 1.6e-203 713.4 674 58.0
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 1.6e-203 713.4 667 59.4
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 2.8e-203 712.6 674 58.2
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 2.8e-203 712.6 669 59.5
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 1.8e-202 709.9 659 58.1
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 9.1e-202 707.6 674 58.5
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 3.4e-201 705.7 683 57.0
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 4.5e-201 705.3 661 57.0
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.2e-199 699.1 670 56.6
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 7.2e-199 698.0 679 56.4
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 3.6e-198 695.7 666 58.0
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 4.6e-198 695.3 684 56.4
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 6.1e-198 694.9 669 56.8
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 7.9e-198 694.5 664 56.9
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 1.0e-197 694.1 682 55.4
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.4e-197 693.7 670 55.8
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 1.4e-197 693.7 667 56.7
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 1.4e-197 693.7 666 56.8
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 1.8e-197 693.3 676 57.2
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 2.3e-197 693.0 709 55.7
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 5.1e-197 691.8 679 57.6
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 5.1e-197 691.8 672 57.3
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 1.1e-196 690.6 690 56.1
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.5e-196 690.3 659 57.2
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 2.0e-196 689.9 678 57.1
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 2.0e-196 689.9 676 57.0
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.0e-196 689.9 594 61.1
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 2.6e-196 689.5 677 57.5
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 4.4e-196 688.7 672 56.2
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.7e-195 686.8 677 57.2
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 2.8e-195 686.0 681 56.1
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 2.8e-195 686.0 680 57.4
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 1.1e-194 684.1 672 56.1
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.4e-194 683.7 675 55.7
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.4e-194 682.9 673 56.2
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 5.3e-194 681.8 677 56.3
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 3.4e-193 679.1 670 55.2
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 4.5e-193 678.7 692 56.1
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 7.7e-193 677.9 679 55.7
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 3.8e-192 675.6 670 55.1
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.9e-191 673.3 677 56.4
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 2.1e-190 669.8 662 55.3
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.1e-190 669.8 680 55.1
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 2.3e-189 666.4 676 54.4
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 2.6e-188 662.9 690 55.1
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 3.7e-187 659.1 654 55.8
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.3e-184 650.6 669 54.1
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.5e-183 646.4 672 53.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 1.2e-182 644.0 686 53.1
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 4.7e-182 642.1 690 53.0
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.8e-181 640.2 701 52.4
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.0e-181 639.0 715 51.7
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 1.5e-180 637.1 672 53.9
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 2.6e-180 636.3 676 52.5
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 3.3e-180 636.0 673 51.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 3.3e-180 636.0 691 52.0
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.2e-179 633.3 701 50.8
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 2.2e-179 633.3 669 52.3
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 1.1e-178 630.9 678 52.1
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 4.1e-178 629.0 690 51.7
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.4e-173 614.0 667 52.5
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 4.0e-173 612.5 668 51.9
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 3.4e-172 609.4 646 52.5
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 3.7e-171 605.9 688 50.1
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 9.1e-170 601.3 671 50.7
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 7.7e-169 598.2 649 52.5
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.3e-168 596.7 704 49.7
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 9.5e-167 591.3 653 51.5
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 2.3e-165 586.6 597 53.8
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 8.8e-165 584.7 640 50.6
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 6.6e-160 568.5 685 49.8
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 4.3e-159 565.8 500 58.8
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.6e-159 565.5 665 49.0
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 6.1e-158 562.0 518 58.5
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.0e-157 561.2 649 50.2
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 9.8e-156 554.7 652 49.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 1.3e-155 554.3 709 46.5
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.0e-152 544.7 511 57.7
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 3.0e-152 543.1 641 50.7
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 6.4e-147 525.4 516 56.2
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.0e-145 518.8 597 50.4
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.3e-143 511.9 679 46.4
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.3e-141 506.9 674 44.7
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.7e-137 493.4 673 43.7
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.4e-133 481.1 668 45.1
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 8.9e-133 478.4 535 52.3
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 2.9e-131 473.4 551 50.1
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 7.1e-122 442.2 462 54.3
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.9e-119 434.1 437 53.5
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 2.8e-118 430.3 484 51.7
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 6.2e-118 429.1 653 42.6
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 3.8e-115 419.9 604 43.7
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.2e-113 414.8 444 53.4
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.5e-111 407.9 675 41.2
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.1e-110 404.1 559 42.9
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.5e-108 397.9 686 39.9
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 6.4e-107 392.5 681 39.8
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.0e-104 385.2 561 43.9
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 1.3e-99 368.2 481 47.4
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.3e-96 358.2 270 70.7
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.5e-95 354.0 350 55.1
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 1.3e-91 341.7 323 57.0
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 8.5e-91 339.0 811 34.2
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 4.2e-90 336.7 401 46.9
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 5.9e-84 316.2 686 35.1
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.7e-84 315.8 279 59.5
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 1.8e-80 304.7 281 55.9
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.4e-71 272.7 334 48.2
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 6.5e-67 259.6 260 57.3
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 1.5e-63 248.4 415 41.0
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 3.7e-62 243.8 300 44.0
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 3.7e-62 243.8 630 31.4
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 4.1e-61 240.4 626 32.7
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 6.1e-49 199.9 206 54.9
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.5e-42 177.9 702 28.8
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 4.0e-40 170.6 150 60.0
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 4.6e-36 157.1 245 39.2
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 8.3e-30 136.3 134 56.0
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 7.0e-29 133.3 158 50.6
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 4.6e-20 104.0 123 52.0
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.3e-19 102.4 86 59.3
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.0e-19 101.3 61 83.6
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 6.6e-19 100.1 119 48.7
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 1.8e-16 92.0 68 61.8
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 3.4e-15 87.8 104 42.3
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 3.4e-15 87.8 83 56.6
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.9e-13 82.0 96 55.2
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 2.4e-13 81.6 133 39.8
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 7.1e-13 80.1 95 47.4
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 1.9e-10 72.0 124 38.7
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-09 68.9 45 73.3
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 2.1e-09 68.6 79 55.7
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 2.8e-09 68.2 57 56.1
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 8.1e-09 66.6 44 75.0
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-08 66.2 78 47.4
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 1.1e-08 66.2 46 60.9
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 1.8e-08 65.5 49 63.3
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 3.1e-08 64.7 88 40.9
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-07 62.8 100 39.0
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 3.4e-07 61.2 54 55.6
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 1.7e-06 58.9 48 58.3
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 6.4e-06 57.0 47 57.4


User provided reference genes

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