Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G1021 Erigeron canadensis HOM05D011992 ORTHO05D015805 8.2e-143 510.4 258 100.0
ECA232G2820 Erigeron canadensis HOM05D011992 ORTHO05D015805 5.3e-73 278.5 252 62.3
ECA233G3694 Erigeron canadensis HOM05D011992 ORTHO05D015805 1.7e-63 246.9 179 71.5
ECA246G3386 Erigeron canadensis HOM05D011992 ORTHO05D015805 3.2e-54 216.1 246 53.7
ECA233G3388 Erigeron canadensis HOM05D011992 ORTHO05D015805 1.5e-43 180.6 127 72.4
HanXRQChr03g0062901 Helianthus annuus HOM05D011992 ORTHO05D008321 1.4e-33 147.5 140 54.3
HanXRQChr14g0436651 Helianthus annuus HOM05D011992 ORTHO05D221736 2.4e-33 146.7 135 54.8
HanXRQChr11g0352601 Helianthus annuus HOM05D011992 ORTHO05D000574 2.7e-29 133.3 131 52.7
HanXRQChr13g0392581 Helianthus annuus HOM05D011992 ORTHO05D000574 2.7e-29 133.3 131 52.7
ECA232G2791 Erigeron canadensis HOM05D011992 ORTHO05D008321 4.4e-27 125.9 225 36.0
HanXRQChr10g0307001 Helianthus annuus HOM05D011992 ORTHO05D223970 4.8e-26 122.5 132 49.2
HanXRQChr12g0369701 Helianthus annuus HOM05D011992 ORTHO05D224349 2.4e-25 120.2 132 48.5
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.6e-21 107.5 103 51.5
HanXRQChr17g0556681 Helianthus annuus HOM05D011992 ORTHO05D015805 5.2e-20 102.4 68 73.5
ECA233G5280 Erigeron canadensis HOM05D004486 ORTHO05D006329 4.4e-19 99.4 91 53.8
ECA248G1737 Erigeron canadensis HOM05D039510 ORTHO05D015805 2.2e-15 87.0 60 75.0
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.9e-14 84.0 97 45.4
ECA240G4076 Erigeron canadensis HOM05D000493 ORTHO05D001638 1.4e-12 77.8 113 45.1
Dinv29319 Davidia involucrata HOM05D001918 ORTHO05D001931 2.8e-10 70.1 56 76.8
Hma1.2p1_0811F.1_g222110 Hydrangea macrophylla HOM05D001918 ORTHO05D001931 2.8e-10 70.1 56 76.8
HanXRQChr06g0181581 Helianthus annuus HOM05D001918 ORTHO05D001931 3.7e-10 69.7 48 81.2
Duzib170G0436 Durio zibethinus HOM05D001918 ORTHO05D001931 6.3e-10 68.9 56 75.0
CSS0013797 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 8.3e-10 68.6 56 75.0
CSS0039146 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 8.3e-10 68.6 56 75.0
ECA238G2298 Erigeron canadensis HOM05D001918 ORTHO05D001931 8.3e-10 68.6 48 81.2
ECA233G3805 Erigeron canadensis HOM05D001918 ORTHO05D001931 1.1e-09 68.2 56 73.2
RcHm_v2.0_Chr5g0050171 Rosa chinensis HOM05D001918 ORTHO05D001931 1.1e-09 68.2 56 75.0
SalBow6G2481 Salvia bowleyana HOM05D001918 ORTHO05D001931 1.1e-09 68.2 56 75.0
CSS0031102 Camellia sinensis var. sinensis HOM05D001918 ORTHO05D001931 1.4e-09 67.8 56 75.0
arahy.Tifrunner.gnm1.ann1.L6NVF8 Arachis hypogaea HOM05D001918 ORTHO05D001931 1.8e-09 67.4 56 73.2
Lj6g0013688 Lotus japonicus HOM05D001918 ORTHO05D001931 1.8e-09 67.4 56 73.2
SGA_v2.0_scaffold26G11391 Striga asiatica HOM05D001918 ORTHO05D001931 1.8e-09 67.4 56 73.2
Cpa.g.sc34.193 Carica papaya HOM05D001918 ORTHO05D001931 2.4e-09 67.0 56 73.2
arahy.Tifrunner.gnm1.ann1.I6T9ZP Arachis hypogaea HOM05D001918 ORTHO05D001931 3.1e-09 66.6 56 69.6
Lalb_Chr15g0080161 Lupinus albus HOM05D001918 ORTHO05D001931 3.1e-09 66.6 56 71.4
Sed0002720 Sechium edule HOM05D001918 ORTHO05D001931 3.1e-09 66.6 56 73.2
DCAR_031620 Daucus carota HOM05D001918 ORTHO05D001931 4.1e-09 66.2 56 71.4
Glyma.13G120100 Glycine max HOM05D001918 ORTHO05D001931 4.1e-09 66.2 56 73.2
Glyma.20G044200 Glycine max HOM05D001918 ORTHO05D001931 4.1e-09 66.2 56 73.2
unitig_8.g3654 Utricularia gibba HOM05D001918 ORTHO05D001931 4.1e-09 66.2 57 70.2
Gohir.A13G220100 Gossypium hirsutum HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 71.4
Gohir.D13G224100 Gossypium hirsutum HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 71.4
Gorai.013G254900 Gossypium raimondii HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 71.4
Oeu025920.2 Olea europaea HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
Oeu061690.1 Olea europaea HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
Phvul.006G016800 Phaseolus vulgaris HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
PGR119G2089 Punica granatum HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
QL01p016274 Quercus lobata HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
VMungo0540G1010 Vigna mungo HOM05D001918 ORTHO05D001931 5.4e-09 65.9 56 73.2
COL.COLO4_06630 Corchorus olitorius HOM05D001918 ORTHO05D001931 7.0e-09 65.5 56 71.4
Medtr5g088860 Medicago truncatula HOM05D001918 ORTHO05D001931 7.0e-09 65.5 56 71.4
arahy.Tifrunner.gnm1.ann1.X7GI04 Arachis hypogaea HOM05D001918 ORTHO05D001931 9.1e-09 65.1 56 69.6
MSTRG.21336 Avicennia marina HOM05D001918 ORTHO05D001931 9.1e-09 65.1 56 71.4
Haze_23277 Corylus avellana HOM05D001918 ORTHO05D001931 9.1e-09 65.1 56 69.6
CiPaw.14G110100 Carya illinoinensis HOM05D001918 ORTHO05D001931 1.2e-08 64.7 56 71.4
Glyma.02G277400 Glycine max HOM05D001918 ORTHO05D001931 1.2e-08 64.7 56 71.4
Thecc.09G253200 Theobroma cacao HOM05D001918 ORTHO05D001931 1.2e-08 64.7 56 71.4
VMungo0647G0773 Vigna mungo HOM05D001918 ORTHO05D001931 1.2e-08 64.7 56 71.4
Ca_06181_v3 Cicer arietinum L. HOM05D001918 ORTHO05D001931 1.6e-08 64.3 56 69.6
Medtr3g045180 Medicago truncatula HOM05D001918 ORTHO05D001931 1.6e-08 64.3 56 71.4
Duzib150G0802 Durio zibethinus HOM05D001918 ORTHO05D001931 2.0e-08 63.9 56 71.4
LjContig00564g0012359 Lotus japonicus HOM05D001918 ORTHO05D001931 2.0e-08 63.9 56 69.6
CARHR118930 Cardamine hirsuta HOM05D001918 ORTHO05D001931 2.7e-08 63.5 56 69.6
FAN11G3029 Fragaria x ananassa HOM05D001918 ORTHO05D001931 2.7e-08 63.5 57 70.2
AL4G19960 Arabidopsis lyrata HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 69.6
AT2G26770 Arabidopsis thaliana HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 69.6
Carub.0004s0718 Capsella rubella HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 69.6
Psat2g021360 Pisum sativum HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 67.9
Sp4g08730 Schrenkiella parvula HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 69.6
TPR.G16409 Trifolium pratense HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 67.9
GSVIVG01037402001 Vitis vinifera HOM05D001918 ORTHO05D001931 3.5e-08 63.2 56 67.9
Eucgr.B03757 Eucalyptus grandis HOM05D001918 ORTHO05D001931 4.5e-08 62.8 56 69.6
TWI75G1710 Tripterygium wilfordii HOM05D001918 ORTHO05D001931 4.5e-08 62.8 56 69.6
BcaC02g10839 Brassica carinata HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
A07p17860 Brassica napus HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
C04p24600 Brassica napus HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
BolC4t23964H Brassica oleracea HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
BraA07t29505Z Brassica rapa HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
Gohir.D05G075600 Gossypium hirsutum HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 69.6
Lalb_Chr10g0106091 Lupinus albus HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
unitig_22.g5689 Utricularia gibba HOM05D001918 ORTHO05D001931 5.9e-08 62.4 56 67.9
THA.LOC104800467 Tarenaya hassleriana HOM05D001918 ORTHO05D001931 7.7e-08 62.0 56 67.9
TWI31G0888 Tripterygium wilfordii HOM05D001918 ORTHO05D001931 7.7e-08 62.0 56 69.6
Potri.009G066800 Populus trichocarpa HOM05D001918 ORTHO05D001931 1.0e-07 61.6 56 67.9
Potri.001G272300 Populus trichocarpa HOM05D001918 ORTHO05D001931 1.3e-07 61.2 56 67.9
Sabra16G0167600 Salix brachista HOM05D001918 ORTHO05D001931 1.3e-07 61.2 56 67.9
Aa31LG5G9020 Aethionema arabicum HOM05D001918 ORTHO05D001931 1.7e-07 60.8 56 66.1
Migut.N02386 Erythranthe guttata HOM05D001918 ORTHO05D001931 1.7e-07 60.8 56 66.1
Gorai.009G077000 Gossypium raimondii HOM05D001918 ORTHO05D001931 1.7e-07 60.8 56 67.9
Ca_03899_v3 Cicer arietinum L. HOM05D001918 ORTHO05D001931 2.2e-07 60.5 56 67.9
THA.LOC104826463 Tarenaya hassleriana HOM05D001918 ORTHO05D001931 2.2e-07 60.5 48 70.8
Sabra09G0049700 Salix brachista HOM05D001918 ORTHO05D001931 5.0e-07 59.3 56 66.1
Nn7g36924 Nelumbo nucifera HOM05D001918 ORTHO05D001931 6.5e-07 58.9 48 66.7
CiPaw.13G147700 Carya illinoinensis HOM05D001918 ORTHO05D001931 1.5e-06 57.8 56 62.5
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 1.5e-06 57.8 39 66.7
Lj2A821G9 Lonicera japonica HOM05D001918 ORTHO05D001931 4.2e-06 56.2 48 66.7
TAR386G0002 Trochodendron aralioides HOM05D001918 ORTHO05D001931 7.2e-06 55.5 47 68.1
PSO339G4472 Papaver somniferum HOM05D001918 ORTHO05D001931 9.4e-06 55.1 56 64.3


User provided reference genes

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