Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.2e-58 228.8 121 100.0
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 9.1e-52 206.8 121 87.6
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.7e-50 202.6 121 88.4
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 8.0e-48 193.7 121 84.3
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 8.0e-48 193.7 121 83.5
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 8.0e-48 193.7 121 84.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 8.0e-48 193.7 121 83.5
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-47 192.6 121 82.6
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.8e-47 192.6 121 82.6
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 2.3e-47 192.2 121 81.8
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.0e-47 191.4 121 82.6
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.0e-47 191.4 121 82.6
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 5.2e-47 191.0 121 82.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 5.2e-47 191.0 121 82.6
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.8e-47 190.7 121 82.6
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.2e-46 189.9 121 81.0
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.2e-46 189.9 121 83.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.5e-46 189.5 121 80.2
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 2.0e-46 189.1 121 79.3
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.0e-46 189.1 121 81.0
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.6e-46 188.7 121 82.6
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.4e-46 188.3 120 81.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 4.4e-46 188.0 121 80.2
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 5.7e-46 187.6 121 81.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 7.5e-46 187.2 121 80.2
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 9.8e-46 186.8 121 80.2
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 9.8e-46 186.8 121 79.3
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 9.8e-46 186.8 121 80.2
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.3e-45 186.4 121 80.2
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-45 186.4 121 79.3
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.2e-45 185.7 120 80.0
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.8e-45 185.3 121 80.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 2.8e-45 185.3 121 80.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.8e-45 185.3 121 80.2
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.8e-45 185.3 121 80.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 4.8e-45 184.5 121 81.0
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.8e-45 184.5 121 78.5
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 6.3e-45 184.1 121 78.5
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 8.3e-45 183.7 121 78.5
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 8.3e-45 183.7 121 76.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 8.3e-45 183.7 119 80.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 8.3e-45 183.7 121 79.3
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 8.3e-45 183.7 121 79.3
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 8.3e-45 183.7 121 78.5
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.1e-44 183.3 119 79.8
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.1e-44 183.3 120 79.2
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.4e-44 183.0 121 75.2
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.8e-44 182.6 121 78.5
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.4e-44 182.2 119 77.3
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 2.4e-44 182.2 121 76.9
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.4e-44 182.2 121 77.7
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 3.1e-44 181.8 121 79.3
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.1e-44 181.8 121 76.0
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.1e-44 181.8 117 78.6
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.1e-44 181.8 121 76.9
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 4.1e-44 181.4 119 77.3
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 77.7
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 77.7
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 77.7
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 77.7
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 78.5
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 75.2
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 4.1e-44 181.4 121 77.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 79.3
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 77.7
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 77.7
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 75.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 76.9
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 77.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 5.4e-44 181.0 121 79.3
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.0e-44 180.6 121 72.7
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 7.0e-44 180.6 121 76.0
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 9.1e-44 180.3 117 77.8
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 9.1e-44 180.3 119 77.3
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-43 179.9 121 75.2
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.6e-43 179.5 121 76.0
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.6e-43 179.5 121 75.2
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.6e-43 179.5 121 75.2
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.0e-43 179.1 121 74.4
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.0e-43 179.1 119 76.5
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.0e-43 179.1 119 77.3
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.0e-43 179.1 121 75.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.0e-43 179.1 119 77.3
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-43 179.1 116 79.3
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-43 179.1 116 79.3
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-43 179.1 116 79.3
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.0e-43 179.1 121 74.4
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 3.5e-43 178.3 119 76.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 4.5e-43 177.9 119 78.2
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.9e-43 177.6 119 75.6
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 5.9e-43 177.6 119 74.8
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 7.7e-43 177.2 120 74.2
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.0e-42 176.8 119 78.2
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.3e-42 176.4 121 78.5
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.3e-42 176.4 119 78.2
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.7e-42 176.0 121 76.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.9e-42 175.3 117 76.1
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 6.5e-42 174.1 119 73.1
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.1e-41 173.3 121 73.6
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.1e-41 173.3 121 73.6
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.1e-41 173.3 121 73.6
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 2.5e-41 172.2 119 75.6
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 7.2e-41 170.6 119 72.3
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.2e-40 169.9 119 73.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.6e-40 169.5 118 73.7
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 5.2e-39 164.5 121 70.2
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.2e-38 163.3 107 78.5
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.2e-38 163.3 109 77.1
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.5e-38 162.9 108 78.7
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.0e-38 162.5 121 69.4
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.0e-38 162.5 120 71.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.4e-38 161.4 109 72.5
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 5.7e-38 161.0 107 75.7
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 9.8e-38 160.2 107 74.8
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.3e-37 159.8 121 65.3
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.4e-36 155.6 106 73.6
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.4e-36 155.6 117 70.1
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.2e-35 153.3 119 67.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.0e-35 152.5 104 73.1
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.5e-35 151.4 98 78.6
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 7.8e-35 150.6 100 76.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.3e-34 149.8 121 69.4
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 4.4e-30 134.8 89 75.3
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.7e-29 132.9 92 75.0
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 9.5e-25 117.1 121 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.5e-09 63.9 96 47.9
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.4e-06 55.5 121 37.2


User provided reference genes

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