Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 2.1e-85 318.9 158 100.0
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.1e-68 263.5 158 79.1
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 2.0e-67 259.2 158 78.5
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 3.4e-67 258.5 158 79.1
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 2.9e-66 255.4 158 76.6
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 4.2e-65 251.5 157 77.7
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 4.2e-65 251.5 158 74.7
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 5.5e-65 251.1 158 74.7
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 7.2e-65 250.8 158 75.9
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 7.2e-65 250.8 158 75.9
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 9.4e-65 250.4 153 75.8
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 9.4e-65 250.4 155 78.1
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 2.1e-64 249.2 158 73.4
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 2.7e-64 248.8 155 76.8
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 4.7e-64 248.1 158 73.4
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 6.1e-64 247.7 153 75.8
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 7.9e-64 247.3 158 72.2
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.0e-63 246.9 158 73.4
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 3.9e-63 245.0 158 72.8
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.9e-63 245.0 158 74.7
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.9e-63 245.0 158 74.7
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 6.7e-63 244.2 158 72.2
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 6.7e-63 244.2 149 75.8
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 1.1e-62 243.4 158 70.9
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 2.0e-62 242.7 158 70.3
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 2.6e-62 242.3 156 73.7
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 2.6e-62 242.3 158 71.5
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 2.6e-62 242.3 147 74.8
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 3.3e-62 241.9 158 71.5
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 4.4e-62 241.5 156 73.1
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 5.7e-62 241.1 149 73.8
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 7.4e-62 240.7 146 76.0
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 9.7e-62 240.4 151 72.8
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.3e-61 240.0 156 71.8
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.3e-61 240.0 158 71.5
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 1.3e-61 240.0 153 73.9
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.2e-61 239.2 158 72.8
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 2.2e-61 239.2 156 72.4
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 3.7e-61 238.4 158 69.0
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 3.7e-61 238.4 149 74.5
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 4.8e-61 238.0 151 74.8
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 6.3e-61 237.7 158 72.2
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 6.3e-61 237.7 156 69.9
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 6.3e-61 237.7 158 70.3
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 6.3e-61 237.7 158 69.0
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 8.2e-61 237.3 147 73.5
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 8.2e-61 237.3 157 70.1
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 1.1e-60 236.9 146 74.7
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 1.1e-60 236.9 153 73.9
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.4e-60 236.5 158 70.9
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 1.4e-60 236.5 158 70.3
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 1.8e-60 236.1 156 73.1
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.8e-60 236.1 158 70.3
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.4e-60 235.7 158 69.6
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 3.1e-60 235.3 157 68.8
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 7.0e-60 234.2 158 69.6
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 2.0e-59 232.6 149 72.5
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 2.6e-59 232.3 149 72.5
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 3.5e-59 231.9 153 71.2
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 4.5e-59 231.5 156 68.6
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 7.7e-59 230.7 158 70.9
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 1.0e-58 230.3 149 71.8
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 1.3e-58 229.9 149 72.5
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.2e-58 229.2 149 71.1
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.2e-58 229.2 153 71.9
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 2.9e-58 228.8 149 72.5
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 2.9e-58 228.8 147 69.4
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 3.8e-58 228.4 153 69.3
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.5e-57 226.5 151 69.5
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 1.5e-57 226.5 149 72.5
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 1.9e-57 226.1 158 67.7
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.5e-57 225.7 147 71.4
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 9.4e-57 223.8 147 72.1
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.2e-56 223.4 147 68.7
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.6e-56 223.0 154 70.8
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 2.7e-56 222.2 149 70.5
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 3.6e-56 221.9 160 66.9
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 3.6e-56 221.9 147 71.4
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 6.1e-56 221.1 152 68.4
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 6.1e-56 221.1 135 74.8
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 8.0e-56 220.7 149 69.8
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 8.0e-56 220.7 147 70.1
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 1.0e-55 220.3 149 69.8
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.4e-55 219.9 148 70.3
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.8e-55 219.5 144 70.8
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 4.0e-55 218.4 146 70.5
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 5.2e-55 218.0 149 69.1
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 4.4e-54 214.9 146 69.9
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 7.5e-54 214.2 143 68.5
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 2.2e-53 212.6 143 69.2
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 2.8e-53 212.2 157 66.9
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 8.2e-53 210.7 147 65.3
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 1.1e-52 210.3 155 66.5
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.4e-52 209.9 155 65.8
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 1.4e-52 209.9 155 65.8
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 1.8e-52 209.5 155 65.8
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 2.4e-52 209.1 155 65.8
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 3.1e-52 208.8 157 63.1
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 4.1e-52 208.4 157 63.1
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 5.3e-52 208.0 157 63.1
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 9.1e-52 207.2 157 63.1
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.6e-51 206.5 155 64.5
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 2.0e-51 206.1 144 64.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.0e-50 203.8 156 61.5
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 1.7e-50 203.0 146 65.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.7e-50 203.0 127 76.4
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 2.9e-50 202.2 155 63.2
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 2.9e-50 202.2 155 63.2
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.2e-49 198.7 146 63.7
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.0e-47 193.7 127 74.8
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.4e-47 193.4 147 59.2
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 1.7e-45 186.4 157 59.2
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 1.7e-45 186.4 142 59.9
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.4e-44 182.6 145 57.9
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.2e-42 176.0 146 56.8
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 8.0e-40 167.5 142 57.0
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 5.2e-39 164.9 99 77.8
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 8.8e-39 164.1 131 58.0
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 2.6e-38 162.5 110 70.0
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.4e-38 162.2 118 64.4
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 9.8e-38 160.6 146 50.0
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 5.4e-36 154.8 148 49.3
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.7e-34 149.8 145 50.3
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.4e-31 140.2 143 51.0
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 1.8e-31 139.8 132 55.3
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.5e-30 136.7 98 63.3
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.2e-29 132.9 96 61.5
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 1.8e-28 129.8 145 48.3
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 9.2e-28 127.5 141 48.9
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 1.8e-23 113.2 146 41.1
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 1.2e-22 110.5 147 43.5
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 3.2e-20 102.4 84 53.6
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 4.1e-20 102.1 84 56.0
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 5.4e-20 101.7 75 64.0


User provided reference genes

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