Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 5.8e-183 644.0 316 100.0
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.3e-142 510.0 317 80.1
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 1.2e-127 460.3 317 72.9
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.6e-122 442.6 325 64.3
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 7.5e-122 441.0 323 64.1
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.7e-121 438.7 323 66.3
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 2.0e-119 433.0 330 63.6
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.2e-116 423.7 325 64.3
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.1e-116 421.4 326 62.9
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.1e-116 421.4 326 62.9
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 4.0e-115 418.7 330 62.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.4e-112 409.5 322 60.2
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.4e-112 409.5 322 60.9
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.2e-112 409.1 330 60.3
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.1e-112 408.7 322 60.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 5.4e-112 408.3 333 61.3
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 9.2e-112 407.5 328 59.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 9.2e-112 407.5 330 61.8
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.6e-111 406.8 342 58.8
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.7e-111 406.0 321 61.7
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.6e-111 405.2 330 60.9
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 6.0e-111 404.8 331 58.9
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 5.0e-110 401.7 325 61.2
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 8.6e-110 401.0 330 60.0
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.9e-109 399.8 324 61.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 2.5e-109 399.4 330 60.9
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 3.3e-109 399.1 321 61.4
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 5.6e-109 398.3 329 59.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 7.3e-109 397.9 330 58.2
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.6e-108 396.7 328 60.1
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 2.8e-108 396.0 323 61.0
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 2.3e-107 392.9 329 59.0
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.3e-107 392.9 329 59.0
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 5.2e-107 391.7 329 57.4
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.4e-106 389.0 324 59.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.3e-105 387.1 329 56.2
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.2e-105 386.3 300 63.3
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 2.9e-105 386.0 324 59.6
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.9e-105 386.0 328 57.3
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 3.7e-105 385.6 313 61.0
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 4.9e-105 385.2 330 58.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 6.4e-105 384.8 316 59.5
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 6.4e-105 384.8 329 57.8
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.4e-104 383.6 316 59.8
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 5.4e-104 381.7 319 58.0
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 7.1e-104 381.3 320 58.8
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 7.1e-104 381.3 321 58.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.7e-103 379.4 332 58.1
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.7e-103 379.4 332 58.1
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 4.6e-103 378.6 326 57.1
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 7.8e-103 377.9 320 58.4
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 2.3e-102 376.3 316 56.6
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 5.1e-102 375.2 327 56.6
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.9e-101 373.2 345 52.8
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.5e-101 372.9 330 54.5
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 3.3e-101 372.5 327 58.7
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 5.6e-101 371.7 322 59.3
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.2e-100 370.5 327 56.6
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.6e-100 370.2 329 56.8
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.6e-100 369.0 315 57.8
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 6.2e-100 368.2 327 56.0
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.1e-99 367.5 329 56.8
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.4e-99 367.1 329 55.0
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 3.1e-99 365.9 332 55.1
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 6.8e-99 364.8 330 55.5
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.2e-98 364.0 329 54.7
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 2.6e-98 362.8 329 55.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.8e-98 361.7 332 56.3
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 3.7e-97 359.0 298 61.1
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.4e-96 357.1 326 54.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.6e-95 353.6 279 63.1
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 4.6e-95 352.1 329 52.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 2.3e-94 349.7 329 52.9
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 3.0e-94 349.4 280 61.1
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 5.1e-94 348.6 333 52.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.6e-92 343.6 316 54.4
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 6.2e-92 341.7 316 55.1
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 6.2e-92 341.7 370 51.4
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.4e-91 339.7 318 55.3
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.4e-91 339.7 318 55.3
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 3.1e-91 339.3 322 53.4
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 4.0e-91 339.0 318 55.0
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 8.9e-91 337.8 334 51.8
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 3.4e-90 335.9 319 54.9
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.4e-90 335.5 322 53.1
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.9e-89 332.8 289 56.4
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.1e-88 330.9 324 52.8
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.0e-86 324.3 267 59.9
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 3.0e-86 322.8 320 52.5
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 8.7e-86 321.2 329 50.5
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 8.7e-86 321.2 321 52.3
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 7.6e-82 308.1 330 47.3
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 4.2e-80 302.4 330 50.6
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 3.6e-76 289.3 341 44.6
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.8e-76 288.9 322 47.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 3.8e-73 279.3 327 43.7
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 8.4e-73 278.1 317 45.7
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 1.4e-72 277.3 346 43.9
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.0e-70 271.2 263 52.1
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 8.4e-65 251.5 330 42.4
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.6e-63 247.3 252 52.4
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 6.7e-62 241.9 210 60.0
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 3.3e-61 239.6 384 36.7
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 8.2e-60 235.0 188 62.8
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.9e-57 226.5 383 35.2
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 2.2e-44 183.7 134 64.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.1e-43 179.9 149 61.7
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.2e-42 177.9 133 65.4
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 4.4e-37 159.5 325 32.9
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.2e-36 157.1 98 74.5
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.2e-36 157.1 117 61.5
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 8.2e-36 155.2 134 55.2
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 8.8e-30 135.2 104 63.5
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.4e-29 132.9 200 37.0
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 4.4e-29 132.9 112 61.6
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 5.5e-24 115.9 87 60.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.6e-23 114.4 107 53.3
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.3e-20 104.8 144 44.4
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.7e-17 94.4 109 47.7
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.6e-15 86.7 59 67.8
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 8.0e-15 85.5 321 23.7
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.2e-14 82.8 67 59.7
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 5.7e-13 79.3 100 46.0
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.9e-09 67.0 49 55.1
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.5e-08 64.7 46 67.4


User provided reference genes

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