Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0558 Erigeron canadensis HOM05D001067 ORTHO05D000876 8.5e-143 510.4 267 100.0
HanXRQChr09g0257431 Helianthus annuus HOM05D001067 ORTHO05D000876 1.8e-12 77.4 46 80.4
Lsat_1_v5_gn_9_103120 Lactuca sativa HOM05D001067 ORTHO05D000876 4.2e-09 66.2 53 62.3
QL04p066683 Quercus lobata HOM05D001067 ORTHO05D000876 6.1e-08 62.4 43 67.4
Nn3g19328 Nelumbo nucifera HOM05D001067 ORTHO05D000876 2.3e-07 60.5 50 62.0
TAR627G0898 Trochodendron aralioides HOM05D001067 ORTHO05D000876 2.3e-07 60.5 88 43.2
Nn3g19329 Nelumbo nucifera HOM05D001067 ORTHO05D000876 3.0e-07 60.1 47 63.8
RcHm_v2.0_Chr2g0155281 Rosa chinensis HOM05D001067 ORTHO05D000876 5.2e-07 59.3 46 65.2
SGA_v2.0_scaffold168G38587 Striga asiatica HOM05D001067 ORTHO05D000876 6.8e-07 58.9 44 65.9
RcHm_v2.0_Chr5g0024491 Rosa chinensis HOM05D001067 ORTHO05D000876 8.8e-07 58.5 54 55.6
TAR627G1187 Trochodendron aralioides HOM05D001067 ORTHO05D000876 8.8e-07 58.5 47 61.7
GSVIVG01030133001 Vitis vinifera HOM05D000191 ORTHO05D000122 8.8e-07 58.5 50 62.0
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 1.2e-06 58.2 45 60.0
FvH4_3g14891 Fragaria vesca HOM05D001067 ORTHO05D000876 1.2e-06 58.2 82 39.0
Prupe.3G193300 Prunus persica HOM05D001067 ORTHO05D000876 1.2e-06 58.2 50 60.0
Ah.02g112250 Amaranthus hybridus HOM05D001067 ORTHO05D000876 1.5e-06 57.8 35 80.0
CSS0041838 Camellia sinensis var. sinensis HOM05D001067 ORTHO05D000876 1.5e-06 57.8 54 59.3
FvH4_3g14901 Fragaria vesca HOM05D001067 ORTHO05D000876 1.5e-06 57.8 82 39.0
PSO541G3924 Papaver somniferum HOM05D001067 ORTHO05D000876 1.5e-06 57.8 45 64.4
RcHm_v2.0_Chr5g0024501 Rosa chinensis HOM05D001067 ORTHO05D000876 1.5e-06 57.8 52 50.0
TAR627G0314 Trochodendron aralioides HOM05D001067 ORTHO05D000876 1.5e-06 57.8 92 43.5
FvH4_3g14890 Fragaria vesca HOM05D001067 ORTHO05D000876 2.0e-06 57.4 46 65.2
Lj1P896T31 Lonicera japonica HOM05D001067 ORTHO05D000876 2.0e-06 57.4 51 60.8
Prupe.3G193400 Prunus persica HOM05D000191 ORTHO05D000122 2.0e-06 57.4 52 57.7
TPR.G28414 Trifolium pratense HOM05D001067 ORTHO05D000876 2.0e-06 57.4 41 68.3
Cc05_g01870 Coffea canephora HOM05D001067 ORTHO05D000876 2.6e-06 57.0 50 58.0
Glyma.19G034300 Glycine max HOM05D001067 ORTHO05D000876 2.6e-06 57.0 78 41.0
Hma1.2p1_0193F.1_g084050 Hydrangea macrophylla HOM05D001067 ORTHO05D000876 2.6e-06 57.0 41 65.9
Cfa016934 Carpinus fangiana HOM05D001067 ORTHO05D000876 3.4e-06 56.6 48 54.2
Cfa016937 Carpinus fangiana HOM05D001067 ORTHO05D000876 3.4e-06 56.6 42 61.9
Cc05_g01890 Coffea canephora HOM05D001067 ORTHO05D000876 3.4e-06 56.6 45 57.8
Haze_09892 Corylus avellana HOM05D001067 ORTHO05D000876 3.4e-06 56.6 42 61.9
MELO3C013209.2 Cucumis melo HOM05D001067 ORTHO05D000876 3.4e-06 56.6 50 60.0
FAN11G1903 Fragaria x ananassa HOM05D001067 ORTHO05D000876 3.4e-06 56.6 82 37.8
MBI15_g19863_MAGBIO Magnolia biondii HOM05D001067 ORTHO05D000876 3.4e-06 56.6 42 64.3
Prupe.3G193000 Prunus persica HOM05D001067 ORTHO05D000876 3.4e-06 56.6 77 44.2
Prupe.4G133400 Prunus persica HOM05D001067 ORTHO05D000876 3.4e-06 56.6 47 61.7
Dinv05330 Davidia involucrata HOM05D001067 ORTHO05D000876 4.4e-06 56.2 47 61.7
Medtr6g082340 Medicago truncatula HOM05D001067 ORTHO05D000876 4.4e-06 56.2 98 41.8
Phvul.004G042200 Phaseolus vulgaris HOM05D001067 ORTHO05D000876 4.4e-06 56.2 40 67.5
LjContig00272g0025906 Lotus japonicus HOM05D001067 ORTHO05D000876 5.7e-06 55.8 70 44.3
Rhsim06G0233700 Rhododendron simsii HOM05D001067 ORTHO05D000876 5.7e-06 55.8 43 60.5
HPP92_007498 Vanilla planifolia HOM05D001067 ORTHO05D000876 5.7e-06 55.8 51 54.9
GSVIVG01012535001 Vitis vinifera HOM05D001067 ORTHO05D000876 5.7e-06 55.8 43 65.1
FvH4_6g40260 Fragaria vesca HOM05D001067 ORTHO05D000876 7.5e-06 55.5 41 68.3
FAN02G4555 Fragaria x ananassa HOM05D000191 ORTHO05D000876 7.5e-06 55.5 41 68.3
FAN09G1498 Fragaria x ananassa HOM05D005343 ORTHO05D007153 7.5e-06 55.5 41 68.3
FAN14G1200 Fragaria x ananassa HOM05D001067 ORTHO05D000876 7.5e-06 55.5 41 68.3
Peaxi162Scf00232g10022 Petunia axillaris HOM05D001067 ORTHO05D000876 7.5e-06 55.5 93 40.9
QL04p066661 Quercus lobata HOM05D001067 ORTHO05D000876 7.5e-06 55.5 42 59.5
RcHm_v2.0_Chr2g0155291 Rosa chinensis HOM05D001067 ORTHO05D000876 7.5e-06 55.5 41 68.3
RcHm_v2.0_Chr5g0024391 Rosa chinensis HOM05D001067 ORTHO05D000876 7.5e-06 55.5 44 61.4
Sc13g0008720 Simmondsia chinensis HOM05D001067 ORTHO05D000876 7.5e-06 55.5 43 65.1
TAR629G1281 Trochodendron aralioides HOM05D001067 ORTHO05D000876 7.5e-06 55.5 46 58.7
TAR629G2815 Trochodendron aralioides HOM05D001067 ORTHO05D000876 7.5e-06 55.5 46 58.7
vmacro11624 Vaccinium macrocarpon HOM05D001067 ORTHO05D000876 7.5e-06 55.5 48 54.2
vmacro12054 Vaccinium macrocarpon HOM05D001067 ORTHO05D000876 7.5e-06 55.5 47 55.3
Actinidia10576 Actinidia chinensis HOM05D001067 ORTHO05D000876 9.8e-06 55.1 48 60.4
AUR62011800 Chenopodium quinoa HOM05D001067 ORTHO05D000876 9.8e-06 55.1 35 74.3
AUR62024647 Chenopodium quinoa HOM05D001067 ORTHO05D000876 9.8e-06 55.1 35 74.3
MD09G1133600 Malus domestica HOM05D001067 ORTHO05D000876 9.8e-06 55.1 96 37.5
MD10G1210100 Malus domestica HOM05D001067 ORTHO05D000876 9.8e-06 55.1 82 37.8
PSO675G4046 Papaver somniferum HOM05D001067 ORTHO05D000876 9.8e-06 55.1 66 48.5
Prupe.4G133500 Prunus persica HOM05D001067 ORTHO05D000876 9.8e-06 55.1 47 59.6


User provided reference genes

Program Settings