Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 8.6e-67 256.9 135 100.0
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 2.1e-44 182.6 147 74.8
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 4.6e-44 181.4 142 79.6
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 4.0e-40 168.3 133 71.4
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 7.6e-31 137.5 134 64.2
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 5.6e-26 121.3 128 59.4
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 1.3e-25 120.2 130 60.0
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.4e-24 116.7 132 59.8
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 2.4e-24 115.9 126 59.5
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 6.9e-24 114.4 125 53.6
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.2e-23 113.6 143 55.2
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 2.0e-23 112.8 126 55.6
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 4.9e-22 108.2 129 58.1
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.4e-21 105.9 134 53.7
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 4.2e-21 105.1 138 55.8
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 4.2e-21 105.1 127 57.5
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 9.3e-21 104.0 127 57.5
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 4.6e-20 101.7 136 53.7
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 4.6e-20 101.7 136 53.7
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.6e-20 101.7 134 52.2
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 1.8e-19 99.8 119 53.8
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 2.3e-19 99.4 138 53.6
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 1.3e-17 93.6 129 53.5
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-16 90.1 168 44.6
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 2.4e-16 89.4 90 65.6
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 2.4e-16 89.4 127 50.4
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 1.2e-15 87.0 122 54.1
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 1.2e-15 87.0 167 44.9
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 2.0e-15 86.3 118 50.8
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 3.4e-15 85.5 122 45.1
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 5.8e-15 84.7 130 46.2
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.3e-14 83.6 108 52.8
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.7e-14 83.2 108 51.9
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 2.2e-14 82.8 108 51.9
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 2.9e-14 82.4 127 48.8
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 8.4e-14 80.9 161 44.7
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.4e-13 80.1 131 48.1
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 3.2e-13 79.0 100 53.0
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 4.2e-13 78.6 104 60.6
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 5.5e-13 78.2 129 45.0
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 9.3e-13 77.4 145 44.1
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 2.1e-12 76.3 119 44.5
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 2.7e-12 75.9 136 42.6
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 2.7e-12 75.9 105 47.6
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 2.7e-12 75.9 105 55.2
Peaxi162Scf00460g00044 Petunia axillaris HOM05D007324 ORTHO05D007884 2.7e-12 75.9 135 45.9
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 2.7e-12 75.9 131 45.8
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 3.5e-12 75.5 103 50.5
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 3.5e-12 75.5 122 46.7
Actinidia09218 Actinidia chinensis HOM05D007324 ORTHO05D007884 7.9e-12 74.3 133 44.4
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 2.3e-11 72.8 84 54.8
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 3.9e-11 72.0 85 57.6
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 3.9e-11 72.0 126 46.0
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 8.7e-11 70.9 118 44.9
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 8.7e-11 70.9 118 44.9
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 8.7e-11 70.9 133 42.9
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 1.9e-10 69.7 136 43.4
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.5e-10 69.3 133 39.1
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 2.5e-10 69.3 137 48.2
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 3.3e-10 68.9 139 44.6
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 4.3e-10 68.6 101 48.5
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 7.4e-10 67.8 95 53.7
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 2.8e-09 65.9 134 43.3
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 2.8e-09 65.9 134 43.3
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 2.8e-09 65.9 126 45.2
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 4.8e-09 65.1 74 56.8
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 4.8e-09 65.1 125 46.4
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 6.2e-09 64.7 135 39.3
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 6.2e-09 64.7 135 39.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 8.2e-09 64.3 115 45.2
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 8.2e-09 64.3 126 42.9
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 1.1e-08 63.9 122 46.7
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.8e-08 63.2 74 56.8
Dinv28942 Davidia involucrata HOM05D007324 ORTHO05D007884 1.8e-08 63.2 136 40.4
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.5e-07 60.1 122 45.9
BcaB02g09441 Brassica carinata HOM05D011082 ORTHO05D007884 2.6e-07 59.3 92 47.8
Nitab4.5_0008428g0010 Nicotiana tabacum HOM05D007324 ORTHO05D007884 7.6e-07 57.8 126 39.7
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 1.3e-06 57.0 52 69.2
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 2.2e-06 56.2 140 40.0
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.2e-06 56.2 128 41.4
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 2.2e-06 56.2 83 48.2
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 3.8e-06 55.5 154 36.4
BraA05t19986Z Brassica rapa HOM05D011082 ORTHO05D007884 4.9e-06 55.1 91 44.0
Sp4g17510 Schrenkiella parvula HOM05D011082 ORTHO05D007884 4.9e-06 55.1 101 44.6
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 8.4e-06 54.3 127 39.4
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 8.4e-06 54.3 113 39.8
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 8.4e-06 54.3 132 37.1
GSVIVG01013196001 Vitis vinifera HOM05D007324 ORTHO05D007884 8.4e-06 54.3 123 39.0


User provided reference genes

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