Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.5e-71 271.9 132 100.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.2e-52 209.9 125 79.2
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.9e-47 192.6 126 73.0
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.1e-45 185.3 118 73.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 5.3e-45 184.5 125 70.4
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 5.3e-45 184.5 125 70.4
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.0e-45 183.7 125 72.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.0e-44 182.6 119 73.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.4e-44 181.8 119 73.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.0e-43 180.3 123 68.3
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.0e-43 180.3 133 68.4
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.9e-43 178.7 127 65.4
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.9e-43 178.7 127 66.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 3.8e-43 178.3 125 69.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 3.8e-43 178.3 117 72.6
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 4.9e-43 177.9 120 70.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 2.5e-42 175.6 125 66.4
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.5e-42 175.6 125 68.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.5e-42 175.6 125 68.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.2e-42 175.3 119 70.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.2e-42 175.3 119 70.6
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 4.2e-42 174.9 119 71.4
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.2e-42 174.9 119 71.4
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 5.5e-42 174.5 119 71.4
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 5.5e-42 174.5 125 67.2
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 5.5e-42 174.5 125 67.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 7.1e-42 174.1 125 65.6
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 9.3e-42 173.7 119 69.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.2e-41 173.3 119 69.7
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.2e-41 173.3 119 70.6
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.6e-41 172.9 125 68.8
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 1.6e-41 172.9 119 72.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.1e-41 172.6 125 68.0
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.7e-41 172.2 119 69.7
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.5e-41 171.8 123 67.5
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.5e-41 171.8 125 68.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 6.0e-41 171.0 130 63.8
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 6.0e-41 171.0 123 65.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 6.0e-41 171.0 119 68.9
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 7.9e-41 170.6 119 67.2
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.0e-40 170.2 123 65.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.3e-40 169.9 125 66.4
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.8e-40 169.5 125 65.6
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.8e-40 169.5 119 68.1
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.3e-40 169.1 119 67.2
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.3e-40 169.1 123 65.0
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.3e-40 169.1 120 66.7
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 6.7e-40 167.5 122 66.4
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.7e-40 167.2 120 67.5
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 1.5e-39 166.4 118 69.5
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 1.5e-39 166.4 118 69.5
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.9e-39 166.0 125 65.6
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.9e-39 166.0 120 64.2
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.9e-39 166.0 117 65.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 2.5e-39 165.6 118 69.5
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 4.3e-39 164.9 116 67.2
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.3e-39 164.9 119 66.4
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 4.3e-39 164.9 130 62.3
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 5.7e-39 164.5 116 66.4
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 5.7e-39 164.5 116 66.4
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 5.7e-39 164.5 122 64.8
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 7.4e-39 164.1 116 68.1
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 9.7e-39 163.7 113 68.1
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 9.7e-39 163.7 125 64.8
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 9.7e-39 163.7 113 67.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.3e-38 163.3 117 66.7
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.6e-38 162.9 122 62.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.2e-38 162.5 117 68.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.8e-38 162.2 126 64.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.8e-38 162.2 122 62.3
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.8e-38 161.4 117 66.7
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.8e-38 161.4 117 66.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 6.3e-38 161.0 117 66.7
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.1e-37 160.2 114 66.7
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 2.4e-37 159.1 116 66.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.9e-37 157.5 125 64.0
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.2e-36 156.8 117 65.0
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.5e-36 156.4 120 62.5
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.6e-36 155.6 122 60.7
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.4e-36 155.2 119 63.9
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 4.5e-36 154.8 113 64.6
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 7.6e-36 154.1 127 61.4
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 7.6e-36 154.1 129 58.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.0e-35 153.7 117 63.2
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.7e-35 152.9 113 60.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.7e-35 152.9 113 61.1
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.2e-35 152.5 117 60.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.2e-35 152.5 123 61.8
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 2.9e-35 152.1 118 61.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 3.8e-35 151.8 113 61.1
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 6.5e-35 151.0 98 70.4
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 6.5e-35 151.0 114 61.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 8.5e-35 150.6 115 60.9
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.1e-34 150.2 125 56.8
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.9e-34 149.4 119 63.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.2e-34 148.7 113 60.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 3.2e-34 148.7 113 60.2
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 4.2e-34 148.3 113 60.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 4.2e-34 148.3 115 60.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.2e-34 148.3 113 60.2
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 9.3e-34 147.1 113 59.3
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 9.3e-34 147.1 113 59.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.6e-33 146.4 119 59.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.7e-33 145.6 114 58.8
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 3.6e-33 145.2 115 59.1
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.1e-33 144.4 107 63.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 6.1e-33 144.4 115 58.3
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 7.9e-33 144.1 99 66.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 7.9e-33 144.1 125 58.4
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-32 143.3 115 58.3
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.3e-32 143.3 116 57.8
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 5.1e-32 141.4 114 56.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.5e-31 139.0 100 69.0
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 7.4e-31 137.5 115 55.7
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 9.7e-31 137.1 110 57.3
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 9.7e-31 137.1 118 51.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 3.7e-30 135.2 113 56.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 8.2e-30 134.0 115 56.5
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.8e-29 132.9 84 70.2
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.6e-28 129.0 97 66.0
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 4.5e-28 128.3 114 60.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.7e-27 126.3 91 70.3
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 6.5e-27 124.4 125 51.2
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 2.1e-25 119.4 117 48.7
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.3e-22 110.2 85 60.0
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 6.3e-22 107.8 91 54.9
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.6e-20 102.4 77 62.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.6e-17 93.2 61 67.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.0e-15 86.3 82 56.1
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 4.8e-14 81.6 91 48.4
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.6e-12 75.9 70 52.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.7e-06 56.6 49 53.1


User provided reference genes

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