Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 2.1e-262 908.7 511 100.0
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 3.0e-80 303.5 496 45.8
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 2.9e-59 233.8 516 40.1
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 1.8e-53 214.5 557 38.2
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 2.7e-52 210.7 580 36.4
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 1.0e-48 198.7 508 35.8
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 9.8e-47 192.2 507 36.5
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 1.8e-45 188.0 491 36.3
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 2.0e-44 184.5 531 35.8
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.9e-42 177.9 531 35.0
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.3e-42 177.2 513 35.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 7.3e-42 176.0 544 34.9
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 9.5e-42 175.6 253 48.2
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 9.5e-42 175.6 488 32.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.2e-41 175.3 504 32.1
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 3.6e-41 173.7 161 63.4
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 3.6e-41 173.7 162 59.9
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 4.7e-41 173.3 522 33.9
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 6.2e-41 172.9 504 31.7
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 6.2e-41 172.9 162 59.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 6.2e-41 172.9 163 60.1
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.0e-41 172.6 126 73.0
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 8.0e-41 172.6 507 34.5
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.1e-40 172.2 165 59.4
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 1.8e-40 171.4 537 31.8
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 2.3e-40 171.0 505 33.9
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 3.1e-40 170.6 509 33.0
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 4.0e-40 170.2 510 33.3
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 4.0e-40 170.2 485 34.2
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 2.0e-39 167.9 508 32.3
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 4.4e-39 166.8 123 69.1
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 5.8e-39 166.4 121 70.2
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 5.8e-39 166.4 501 32.1
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 9.8e-39 165.6 516 32.4
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.7e-38 164.9 505 33.5
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 6.4e-38 162.9 205 51.2
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 6.4e-38 162.9 366 37.7
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 8.3e-38 162.5 517 31.3
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.4e-37 161.8 500 32.4
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 1.9e-37 161.4 507 35.3
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 1.9e-37 161.4 501 32.7
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 2.4e-37 161.0 510 32.4
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 3.2e-37 160.6 118 72.0
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.1e-37 160.2 87 88.5
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 5.4e-37 159.8 499 31.7
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 7.0e-37 159.5 390 37.9
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 1.2e-36 158.7 127 66.9
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 2.1e-36 157.9 519 32.2
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 3.5e-36 157.1 214 50.0
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 6.0e-36 156.4 515 33.6
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 7.8e-36 156.0 497 33.4
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.0e-35 155.6 127 67.7
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.3e-35 155.2 99 76.8
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.3e-35 155.2 633 30.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 3.0e-35 154.1 164 56.1
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 3.0e-35 154.1 546 31.7
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 3.9e-35 153.7 99 75.8
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 3.9e-35 153.7 521 32.4
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 5.0e-35 153.3 258 43.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 5.0e-35 153.3 126 69.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 5.0e-35 153.3 125 66.4
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 6.6e-35 152.9 548 31.2
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.5e-34 151.8 529 32.7
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.5e-34 151.0 248 44.0
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 4.3e-34 150.2 511 33.7
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 5.6e-34 149.8 286 41.3
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 7.3e-34 149.4 108 70.4
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 9.5e-34 149.1 293 40.6
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.2e-33 148.7 461 32.5
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 2.1e-33 147.9 300 42.7
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 2.1e-33 147.9 127 65.4
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.1e-33 147.9 126 64.3
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 4.7e-33 146.7 234 42.3
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 6.2e-33 146.4 508 32.7
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 8.1e-33 146.0 126 61.1
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.1e-32 145.6 128 62.5
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.4e-32 145.2 513 30.8
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.8e-32 144.8 518 31.1
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 2.3e-32 144.4 121 66.1
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.3e-32 144.4 129 65.9
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 4.0e-32 143.7 126 67.5
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 1.5e-31 141.7 153 56.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.0e-31 141.4 128 62.5
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 3.4e-31 140.6 529 30.8
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 4.4e-31 140.2 370 35.4
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 9.9e-31 139.0 121 60.3
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 9.9e-31 139.0 121 60.3
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 9.9e-31 139.0 121 60.3
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 2.2e-30 137.9 296 38.5
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 2.9e-30 137.5 391 33.5
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.9e-30 137.5 161 51.6
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 8.3e-30 136.0 118 61.0
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 8.3e-30 136.0 118 61.0
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 8.3e-30 136.0 118 61.0
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 1.9e-29 134.8 520 33.7
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 7.1e-29 132.9 518 31.5
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 3.9e-27 127.1 416 32.9
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 5.1e-27 126.7 487 30.6
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 8.6e-27 125.9 512 31.6
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-26 125.6 103 63.1
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.1e-26 125.6 103 63.1
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 2.5e-26 124.4 285 37.2
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.5e-26 124.4 124 54.0
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 4.3e-26 123.6 254 38.2
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 4.3e-26 123.6 519 31.2
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 4.3e-26 123.6 511 29.9
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 7.3e-26 122.9 355 36.1
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 2.8e-25 120.9 125 56.0
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.4e-24 117.9 357 32.8
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 5.2e-24 116.7 506 30.6
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.2e-23 115.5 511 27.2
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-23 114.4 73 74.0
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 5.8e-23 113.2 99 61.6
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 3.2e-21 107.5 94 60.6
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 4.2e-21 107.1 99 60.6
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 3.5e-20 104.0 62 79.0
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 3.0e-19 100.9 593 27.2
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.6e-17 95.1 209 38.3
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 8.1e-17 92.8 390 29.0
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 1.9e-13 81.6 466 30.3
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 7.8e-12 76.3 448 25.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.0e-11 74.3 383 28.5
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 8.7e-11 72.8 55 65.5
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 1.1e-10 72.4 94 52.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.3e-10 70.5 387 30.7
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 9.6e-10 69.3 253 30.8
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 1.8e-08 65.1 80 53.8
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 4.0e-08 63.9 484 25.6
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.5e-07 62.0 34 82.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.5e-07 62.0 34 82.4
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 2.9e-06 57.8 105 39.0


User provided reference genes

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