Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-261 905.6 470 100.0
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 8.3e-125 451.4 476 56.1
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 7.0e-124 448.4 484 55.8
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 8.0e-120 434.9 476 56.1
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 9.3e-76 288.5 482 43.8
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.5e-73 281.2 494 43.3
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 6.2e-72 275.8 499 43.5
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.4e-71 273.9 502 43.6
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 3.2e-68 263.5 489 40.1
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 7.1e-68 262.3 496 41.3
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 2.7e-67 260.4 494 38.9
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.3e-66 258.1 491 39.9
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 2.3e-66 257.3 493 38.9
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 6.6e-66 255.8 478 39.7
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 8.7e-66 255.4 493 40.6
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 8.7e-66 255.4 493 41.4
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.5e-65 254.6 418 46.7
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 3.3e-65 253.4 491 43.4
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 9.6e-65 251.9 361 47.9
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.1e-64 250.8 499 42.5
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 2.8e-64 250.4 489 41.1
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 3.6e-64 250.0 493 44.0
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.1e-63 248.4 493 38.7
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 1.4e-63 248.1 482 38.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 6.9e-63 245.7 489 37.6
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.2e-62 245.0 513 39.4
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.6e-62 243.8 489 37.4
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 3.4e-62 243.4 496 40.7
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 5.8e-62 242.7 423 42.8
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 2.2e-61 240.7 502 38.2
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.9e-61 240.4 489 42.9
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.1e-60 238.4 436 42.2
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.4e-60 238.0 435 43.7
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.2e-60 236.9 436 42.0
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 4.2e-60 236.5 505 39.0
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 2.1e-59 234.2 530 38.1
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 4.6e-59 233.0 318 46.5
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 1.8e-58 231.1 540 37.2
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 3.9e-58 229.9 483 37.7
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.5e-57 227.3 521 36.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 5.6e-57 226.1 508 39.2
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 9.6e-57 225.3 468 37.2
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.7e-56 223.4 581 36.1
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 6.2e-56 222.6 449 42.5
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 8.1e-56 222.2 481 40.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.4e-55 221.5 449 41.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.8e-55 221.1 510 35.5
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 3.1e-55 220.3 551 35.8
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 8.4e-53 212.2 478 35.6
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 5.5e-52 209.5 544 36.2
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 7.1e-52 209.1 426 38.3
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.2e-51 208.4 560 35.5
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 7.9e-51 205.7 488 35.7
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 1.0e-50 205.3 509 34.4
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.8e-50 204.5 549 35.5
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.3e-50 204.1 427 38.2
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 2.3e-50 204.1 369 38.8
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 2.3e-50 204.1 496 36.5
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 5.1e-50 203.0 550 34.0
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.5e-49 201.4 312 43.3
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.1e-48 197.6 578 32.2
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.1e-47 195.3 496 35.1
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 1.4e-47 194.9 525 33.9
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 3.1e-47 193.7 580 33.4
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 5.3e-47 193.0 533 34.0
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 6.9e-47 192.6 586 32.9
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 9.0e-47 192.2 523 33.8
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.5e-46 191.4 520 32.7
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 1.5e-46 191.4 419 38.2
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 2.0e-46 191.0 402 36.6
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 2.0e-46 191.0 536 35.6
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 2.0e-46 191.0 536 33.4
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 3.4e-46 190.3 533 33.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 1.7e-45 188.0 480 34.4
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.9e-45 187.2 589 31.2
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 2.9e-45 187.2 589 31.6
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.9e-45 187.2 589 31.2
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 2.9e-45 187.2 550 33.1
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.9e-45 187.2 357 38.9
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 2.9e-45 187.2 544 34.2
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 3.8e-45 186.8 476 35.5
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 6.5e-45 186.0 583 32.6
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 8.4e-45 185.7 488 37.1
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 1.9e-44 184.5 570 33.2
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 5.5e-44 183.0 585 30.9
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 2.1e-43 181.0 365 36.2
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.7e-43 180.6 555 32.3
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 4.6e-43 179.9 478 34.7
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.3e-42 178.3 422 36.5
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 1.3e-42 178.3 514 32.3
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.8e-42 177.9 524 35.3
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.3e-42 177.6 494 36.6
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 1.1e-41 175.3 576 30.6
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.3e-40 171.8 597 32.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.1e-39 168.7 420 37.6
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 4.5e-38 163.3 366 38.8
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.3e-37 161.8 412 34.5
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.9e-37 160.6 468 31.4
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 2.9e-37 160.6 307 41.4
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.0e-37 159.8 488 31.6
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.5e-36 157.5 637 28.4
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-35 154.8 188 49.5
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.6e-35 154.8 434 35.0
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.6e-35 153.3 538 29.7
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 1.4e-34 151.8 490 32.7
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.4e-34 151.8 298 37.2
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 1.8e-34 151.4 431 34.6
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 2.2e-32 144.4 492 31.3
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.7e-32 143.7 452 30.5
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.4e-31 141.7 338 35.8
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 4.1e-31 140.2 454 33.0
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 2.3e-26 124.4 519 29.3
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.3e-25 120.6 292 37.3
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 6.1e-11 73.2 170 37.6
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 5.2e-10 70.1 66 59.1
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 9.8e-09 65.9 105 39.0


User provided reference genes

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