Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 3.8e-112 408.3 222 100.0
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 3.2e-71 272.3 225 71.1
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 7.2e-63 244.6 230 66.1
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 2.0e-49 199.9 241 52.7
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 2.1e-46 189.9 239 52.7
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 5.4e-42 175.3 250 49.2
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 7.0e-42 174.9 238 47.5
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 2.7e-41 172.9 248 48.4
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.3e-40 170.6 224 49.6
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 3.9e-40 169.1 228 47.4
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 8.6e-40 167.9 223 52.5
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 4.3e-39 165.6 228 46.9
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 5.6e-39 165.2 225 48.9
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 9.5e-39 164.5 230 46.5
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 1.2e-38 164.1 238 46.2
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 2.1e-38 163.3 223 50.2
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 4.7e-38 162.2 224 53.1
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.7e-38 162.2 224 53.1
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.7e-38 162.2 224 53.1
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 6.2e-38 161.8 235 46.0
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 8.1e-38 161.4 223 48.9
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.4e-37 160.6 226 52.7
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 2.3e-37 159.8 227 47.6
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 8.9e-37 157.9 231 41.1
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 8.9e-37 157.9 237 44.3
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 2.6e-36 156.4 243 41.6
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 3.4e-36 156.0 245 46.1
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 9.8e-36 154.5 233 47.2
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 2.2e-35 153.3 231 46.3
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.2e-35 153.3 224 51.3
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 2.9e-35 152.9 250 44.4
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 4.9e-35 152.1 237 46.0
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.1e-34 151.0 232 45.3
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.9e-34 150.2 234 47.0
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 1.9e-34 150.2 234 46.6
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 4.1e-34 149.1 239 44.4
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 1.2e-33 147.5 231 45.9
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-33 147.1 234 49.1
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-33 147.1 224 49.1
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 1.6e-33 147.1 234 45.3
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 1.6e-33 147.1 222 47.3
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 2.7e-33 146.4 234 45.3
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 1.0e-32 144.4 232 44.8
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 2.3e-32 143.3 218 48.6
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 5.1e-32 142.1 234 44.9
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 8.6e-32 141.4 235 45.5
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-31 140.6 238 45.4
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 4.3e-31 139.0 222 45.0
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 9.5e-31 137.9 239 43.5
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 9.5e-31 137.9 226 42.5
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 9.5e-31 137.9 232 44.0
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 1.6e-30 137.1 235 40.4
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 1.6e-30 137.1 232 44.0
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 2.1e-30 136.7 230 44.8
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 2.1e-30 136.7 234 41.9
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 3.6e-30 136.0 239 41.4
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 3.6e-30 136.0 245 41.2
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 3.6e-30 136.0 241 44.8
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 6.2e-30 135.2 238 45.4
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 8.1e-30 134.8 227 45.4
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 1.1e-29 134.4 282 40.4
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 2.3e-29 133.3 241 40.2
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 4.0e-29 132.5 217 47.0
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 4.0e-29 132.5 233 41.2
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 5.2e-29 132.1 233 42.1
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 8.9e-29 131.3 230 42.2
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.2e-28 131.0 218 46.3
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 1.5e-28 130.6 233 45.9
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 2.6e-28 129.8 233 40.8
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 3.4e-28 129.4 233 40.8
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 9.9e-28 127.9 233 42.9
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 3.8e-27 125.9 232 39.7
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 3.8e-27 125.9 221 45.2
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 4.9e-27 125.6 229 41.5
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 4.9e-27 125.6 221 44.3
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.4e-26 124.0 232 39.7
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 2.4e-26 123.2 224 44.6
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 5.4e-26 122.1 217 43.3
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 7.1e-26 121.7 230 40.9
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 9.2e-26 121.3 221 39.8
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 1.2e-25 120.9 230 37.4
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.7e-25 119.8 220 42.7
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 3.0e-24 116.3 198 40.4
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 3.9e-24 115.9 233 37.3
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 8.6e-24 114.8 354 34.5
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 2.5e-23 113.2 186 43.0
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 3.3e-23 112.8 145 51.7
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 9.6e-23 111.3 218 37.6
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.2e-22 110.9 230 39.6
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 3.6e-22 109.4 237 40.1
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 6.2e-22 108.6 209 38.8
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 5.2e-21 105.5 169 46.2
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 6.9e-21 105.1 195 46.2
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 8.9e-21 104.8 223 41.3
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 2.0e-20 103.6 113 55.8
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.6e-20 103.2 236 38.6
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 3.4e-20 102.8 210 40.5
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 5.8e-20 102.1 91 62.6
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 9.9e-20 101.3 198 40.9
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.1e-18 97.8 247 34.4
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 1.1e-18 97.8 221 33.0
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 1.9e-18 97.1 67 67.2
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 1.6e-17 94.0 150 44.0
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 1.0e-16 91.3 69 60.9
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 1.3e-16 90.9 91 49.5
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 4.3e-15 85.9 140 41.4
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.6e-14 84.0 146 41.1
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 1.6e-14 84.0 94 53.2
Lsat_1_v5_gn_8_32340 Lactuca sativa HOM05D006684 ORTHO05D008443 2.8e-14 83.2 94 58.5
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 3.1e-13 79.7 155 38.7
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 4.5e-12 75.9 122 42.6
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 5.8e-12 75.5 215 34.4
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 1.3e-11 74.3 237 29.5
HanXRQChr14g0444521 Helianthus annuus HOM05D006684 ORTHO05D008443 1.7e-11 73.9 118 56.8
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 2.9e-11 73.2 142 40.8
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 3.8e-11 72.8 91 50.5
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 2.4e-10 70.1 233 32.2
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 2.7e-09 66.6 241 29.0
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 6.0e-09 65.5 142 41.5
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 7.9e-09 65.1 179 33.5
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 2.3e-08 63.5 73 50.7


User provided reference genes

Program Settings