Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 9.8e-56 219.9 114 100.0
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 6.6e-52 207.2 114 93.9
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.5e-43 178.7 98 89.8
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 1.1e-25 120.2 114 54.4
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 4.4e-24 114.8 114 55.3
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 2.2e-23 112.5 115 54.8
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.1e-22 110.2 115 53.0
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 1.9e-22 109.4 116 48.3
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 2.4e-22 109.0 114 52.6
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 9.3e-22 107.1 113 50.4
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 1.6e-21 106.3 120 50.0
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 6.0e-21 104.4 113 51.3
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 7.8e-21 104.0 116 51.7
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 1.0e-20 103.6 115 46.1
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 1.0e-20 103.6 115 51.3
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.3e-20 102.4 115 48.7
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 3.9e-20 101.7 116 49.1
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 3.9e-20 101.7 116 49.1
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 3.9e-20 101.7 116 49.1
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 3.9e-20 101.7 114 49.1
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 5.1e-20 101.3 116 47.4
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 5.1e-20 101.3 116 50.0
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 5.1e-20 101.3 116 50.0
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 8.7e-20 100.5 114 49.1
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 8.7e-20 100.5 115 49.6
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 8.7e-20 100.5 119 48.7
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 1.5e-19 99.8 115 50.4
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.5e-19 99.8 115 44.3
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 2.5e-19 99.0 114 48.2
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 2.5e-19 99.0 114 48.2
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 2.5e-19 99.0 111 52.3
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 4.3e-19 98.2 116 50.0
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 7.3e-19 97.4 113 46.9
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 7.3e-19 97.4 113 49.6
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 9.6e-19 97.1 130 46.2
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 1.3e-18 96.7 113 46.9
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 2.1e-18 95.9 113 47.8
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 2.8e-18 95.5 112 50.0
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.8e-18 95.5 113 48.7
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 3.6e-18 95.1 115 47.0
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 3.6e-18 95.1 129 42.6
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 4.8e-18 94.7 118 46.6
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 6.2e-18 94.4 113 45.1
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 6.2e-18 94.4 121 47.9
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 6.2e-18 94.4 112 44.6
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 8.1e-18 94.0 114 45.6
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 8.1e-18 94.0 118 49.2
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 1.1e-17 93.6 112 43.8
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.1e-17 93.6 112 46.4
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 1.4e-17 93.2 116 46.6
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 1.8e-17 92.8 118 46.6
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.4e-17 92.4 116 45.7
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 2.4e-17 92.4 98 52.0
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 5.3e-17 91.3 113 44.2
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 5.3e-17 91.3 113 44.2
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 6.9e-17 90.9 116 44.8
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 9.0e-17 90.5 116 44.8
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 2.0e-16 89.4 118 43.2
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 5.8e-16 87.8 114 44.7
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 7.6e-16 87.4 117 43.6
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 9.9e-16 87.0 115 47.0
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 9.9e-16 87.0 115 45.2
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 9.9e-16 87.0 116 44.8
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 2.2e-15 85.9 112 45.5
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 3.8e-15 85.1 114 45.6
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 3.8e-15 85.1 117 42.7
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 4.9e-15 84.7 113 45.1
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 4.9e-15 84.7 117 42.7
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 6.4e-15 84.3 132 38.6
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.1e-14 83.6 98 48.0
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.4e-14 83.2 98 48.0
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 1.4e-14 83.2 114 43.9
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 2.4e-14 82.4 115 43.5
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 2.4e-14 82.4 112 43.8
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 2.4e-14 82.4 114 44.7
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 2.4e-14 82.4 119 42.0
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 2.4e-14 82.4 113 42.5
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 3.2e-14 82.0 112 42.9
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 3.2e-14 82.0 117 43.6
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 4.2e-14 81.6 118 43.2
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 5.4e-14 81.3 112 42.9
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.1e-13 79.3 116 41.4
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 2.7e-13 79.0 93 46.2
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 2.7e-13 79.0 83 49.4
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 2.7e-13 79.0 99 44.4
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 4.6e-13 78.2 115 42.6
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 1.0e-12 77.0 114 45.6
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 1.0e-12 77.0 114 45.6
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 1.0e-12 77.0 113 42.5
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 1.3e-12 76.6 114 41.2
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 2.3e-12 75.9 66 56.1
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 3.0e-12 75.5 112 40.2
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 3.9e-12 75.1 103 44.7
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 4.3e-11 71.6 51 62.7
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 9.6e-11 70.5 90 46.7
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 2.8e-10 68.9 114 42.1
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 4.8e-10 68.2 77 49.4
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 8.1e-10 67.4 111 40.5
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 2.4e-09 65.9 94 43.6
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 9.9e-08 60.5 46 63.0
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 1.7e-07 59.7 49 53.1
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 8.4e-07 57.4 200 29.5
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 2.4e-06 55.8 50 52.0
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 4.2e-06 55.1 98 38.8


User provided reference genes

Program Settings