Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4771 Erigeron canadensis HOM05D005435 ORTHO05D007370 3.5e-55 218.0 106 100.0
Lalb_Chr01g0018691 Lupinus albus HOM05D005435 ORTHO05D007370 3.5e-39 164.9 97 78.4
arahy.Tifrunner.gnm1.ann1.2UY3HI Arachis hypogaea HOM05D005435 ORTHO05D007370 4.5e-39 164.5 98 76.5
arahy.Tifrunner.gnm1.ann1.3ZC2I8 Arachis hypogaea HOM05D005435 ORTHO05D007370 4.5e-39 164.5 98 76.5
TPR.G32806 Trifolium pratense HOM05D005435 ORTHO05D007370 4.5e-39 164.5 97 78.4
Ca_08861_v3 Cicer arietinum L. HOM05D005435 ORTHO05D007370 1.0e-38 163.3 97 77.3
Atru.chr8.1802 Acer truncatum HOM05D005435 ORTHO05D007370 1.3e-38 162.9 97 76.3
Psat3g042640 Pisum sativum HOM05D005435 ORTHO05D007370 1.3e-38 162.9 97 77.3
Medtr7g101940 Medicago truncatula HOM05D005435 ORTHO05D007370 1.7e-38 162.5 97 77.3
Dinv29103 Davidia involucrata HOM05D005435 ORTHO05D007370 2.3e-38 162.2 97 77.3
HanXRQChr14g0454441 Helianthus annuus HOM05D005435 ORTHO05D007370 2.3e-38 162.2 92 81.5
Potri.006G124400 Populus trichocarpa HOM05D005435 ORTHO05D007370 2.3e-38 162.2 98 76.5
Cc06_g19340 Coffea canephora HOM05D005435 ORTHO05D007370 2.9e-38 161.8 92 81.5
Dinv03347 Davidia involucrata HOM05D005435 ORTHO05D007370 2.9e-38 161.8 97 78.4
ECA238G1020 Erigeron canadensis HOM05D005435 ORTHO05D007370 2.9e-38 161.8 93 80.6
MSTRG.10790 Avicennia marina HOM05D005435 ORTHO05D007370 3.8e-38 161.4 92 82.6
Glyma.03G183400 Glycine max HOM05D005435 ORTHO05D007370 3.8e-38 161.4 97 75.3
Lj1g0010500 Lotus japonicus HOM05D005435 ORTHO05D007370 3.8e-38 161.4 93 79.6
Manes.08G010700 Manihot esculenta HOM05D005435 ORTHO05D007370 5.0e-38 161.0 93 80.6
Sabra06G0098400 Salix brachista HOM05D005435 ORTHO05D007370 5.0e-38 161.0 98 76.5
SalBow6G0607 Salvia bowleyana HOM05D005435 ORTHO05D007370 5.0e-38 161.0 92 81.5
Lsat_1_v5_gn_2_123940 Lactuca sativa HOM05D005435 ORTHO05D007370 6.6e-38 160.6 92 80.4
PGR142G0097 Punica granatum HOM05D005435 ORTHO05D007370 8.6e-38 160.2 92 80.4
QL07p043246 Quercus lobata HOM05D005435 ORTHO05D007370 8.6e-38 160.2 93 80.6
Ah.08g211610 Amaranthus hybridus HOM05D005435 ORTHO05D007370 1.1e-37 159.8 92 81.5
AUR62038498 Chenopodium quinoa HOM05D005435 ORTHO05D007370 1.1e-37 159.8 98 76.5
Lj3C986G3 Lonicera japonica HOM05D005435 ORTHO05D007370 1.1e-37 159.8 93 80.6
Solyc03g119280.3 Solanum lycopersicum HOM05D005435 ORTHO05D007370 1.1e-37 159.8 93 80.6
CANSAT80G1523 Cannabis sativa HOM05D005435 ORTHO05D007370 1.5e-37 159.5 97 76.3
ClCG04G009400 Citrullus lanatus HOM05D005435 ORTHO05D007370 1.5e-37 159.5 97 74.2
Ciclev10013364m.g Citrus clementina HOM05D005435 ORTHO05D007370 1.5e-37 159.5 97 75.3
Sed0000088 Sechium edule HOM05D005435 ORTHO05D007370 1.5e-37 159.5 94 77.7
Thecc.05G067100 Theobroma cacao HOM05D005435 ORTHO05D007370 1.5e-37 159.5 97 75.3
Actinidia33394 Actinidia chinensis HOM05D005435 ORTHO05D007370 1.9e-37 159.1 92 80.4
MELO3C024475.2 Cucumis melo HOM05D005435 ORTHO05D007370 1.9e-37 159.1 94 76.6
Sc20g0005470 Simmondsia chinensis HOM05D005435 ORTHO05D007370 1.9e-37 159.1 91 82.4
EL10Ac7g16635 Beta vulgaris HOM05D005435 ORTHO05D007370 2.5e-37 158.7 92 80.4
Prupe.6G232000 Prunus persica HOM05D005435 ORTHO05D007370 2.5e-37 158.7 97 76.3
TWI53G0628 Tripterygium wilfordii HOM05D005435 ORTHO05D007370 2.5e-37 158.7 93 78.5
VMungo1383G0425 Vigna mungo HOM05D005435 ORTHO05D007370 2.5e-37 158.7 93 77.4
AUR62014241 Chenopodium quinoa HOM05D005435 ORTHO05D007370 3.3e-37 158.3 97 76.3
Hund20359 Selenicereus undatus HOM05D005435 ORTHO05D007370 3.3e-37 158.3 97 77.3
Sopen03g038160 Solanum pennellii HOM05D005435 ORTHO05D007370 3.3e-37 158.3 92 80.4
Cfa017616 Carpinus fangiana HOM05D005435 ORTHO05D007370 4.3e-37 157.9 93 79.6
CsaV3_6G039980 Cucumis sativus L. HOM05D005435 ORTHO05D007370 4.3e-37 157.9 94 75.5
DCAR_017682 Daucus carota HOM05D005435 ORTHO05D007370 4.3e-37 157.9 96 76.0
Thhalv10013386m.g Eutrema salsugineum HOM05D005435 ORTHO05D007370 4.3e-37 157.9 94 77.7
MD12G1112900 Malus domestica HOM05D005435 ORTHO05D007370 4.3e-37 157.9 95 76.8
Nitab4.5_0003433g0040 Nicotiana tabacum HOM05D005435 ORTHO05D007370 4.3e-37 157.9 95 76.8
Phvul.001G179200 Phaseolus vulgaris HOM05D005435 ORTHO05D007370 4.3e-37 157.9 97 74.2
Rhsim12G0137200 Rhododendron simsii HOM05D005435 ORTHO05D007370 4.3e-37 157.9 92 79.3
SGA_v2.0_scaffold105G30289 Striga asiatica HOM05D005435 ORTHO05D007370 4.3e-37 157.9 92 80.4
Gohir.A01G141700 Gossypium hirsutum HOM05D005435 ORTHO05D007370 5.6e-37 157.5 97 74.2
Sp7g12050 Schrenkiella parvula HOM05D005435 ORTHO05D007370 5.6e-37 157.5 98 73.5
Aa31LG1G21750 Aethionema arabicum HOM05D005435 ORTHO05D007370 7.3e-37 157.1 92 79.3
AL6G12730 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 7.3e-37 157.1 92 78.3
BcaNung05574 Brassica carinata HOM05D005435 ORTHO05D007370 7.3e-37 157.1 94 76.6
A08p24260 Brassica napus HOM05D005435 ORTHO05D007370 7.3e-37 157.1 94 76.6
Carub.0005s1195 Capsella rubella HOM05D005435 ORTHO05D007370 7.3e-37 157.1 92 78.3
Gohir.D01G130500 Gossypium hirsutum HOM05D005435 ORTHO05D007370 7.3e-37 157.1 97 74.2
Gorai.002G161900 Gossypium raimondii HOM05D005435 ORTHO05D007370 7.3e-37 157.1 97 74.2
MD04G1093200 Malus domestica HOM05D005435 ORTHO05D007370 7.3e-37 157.1 95 75.8
RcHm_v2.0_Chr3g0470291 Rosa chinensis HOM05D005435 ORTHO05D007370 7.3e-37 157.1 97 75.3
Duzib093G0272 Durio zibethinus HOM05D005435 ORTHO05D007370 9.5e-37 156.8 97 74.2
BolC3t19955H Brassica oleracea HOM05D005435 ORTHO05D007370 1.6e-36 156.0 94 75.5
BraA08t34381Z Brassica rapa HOM05D005435 ORTHO05D007370 1.6e-36 156.0 94 75.5
Haze_20541 Corylus avellana HOM05D005435 ORTHO05D007370 1.6e-36 156.0 93 78.5
Migut.J01655 Erythranthe guttata HOM05D005435 ORTHO05D007370 1.6e-36 156.0 92 79.3
Nitab4.5_0008233g0020 Nicotiana tabacum HOM05D005435 ORTHO05D007370 1.6e-36 156.0 95 75.8
AT5G03406 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 2.1e-36 155.6 94 75.5
FvH4_3g29130 Fragaria vesca HOM05D005435 ORTHO05D007370 2.8e-36 155.2 92 78.3
FAN11G0495 Fragaria x ananassa HOM05D005435 ORTHO05D007370 2.8e-36 155.2 92 78.3
FAN21G2931 Fragaria x ananassa HOM05D005435 ORTHO05D007370 2.8e-36 155.2 92 78.3
AL5G24820 Arabidopsis lyrata HOM05D005435 ORTHO05D007370 4.7e-36 154.5 92 76.1
Aqoxy2G01759 Aquilegia oxysepala HOM05D005435 ORTHO05D007370 6.1e-36 154.1 93 77.4
C03p77020 Brassica napus HOM05D005435 ORTHO05D007370 6.1e-36 154.1 94 74.5
THA.LOC104826914 Tarenaya hassleriana HOM05D005435 ORTHO05D007370 6.1e-36 154.1 97 74.2
AT3G46100 Arabidopsis thaliana HOM05D005435 ORTHO05D007370 1.0e-35 153.3 92 75.0
unitig_899.g15642 Utricularia gibba HOM05D005435 ORTHO05D007370 1.4e-35 152.9 92 78.3
PSO017G6300 Papaver somniferum HOM05D005435 ORTHO05D007370 2.3e-35 152.1 92 78.3
PSO063G1591 Papaver somniferum HOM05D005435 ORTHO05D007370 2.3e-35 152.1 92 78.3
TAR633G1880 Trochodendron aralioides HOM05D005435 ORTHO05D007370 3.0e-35 151.8 92 77.2
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 1.2e-34 149.8 90 78.9
ATR1132G102 Amborella trichopoda HOM05D005435 ORTHO05D007370 2.0e-34 149.1 90 80.0
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 4.4e-34 147.9 109 67.9
AagrBONN_evm.TU.Sc2ySwM_117.1380 Anthoceros agrestis HOM05D005435 ORTHO05D007370 7.5e-34 147.1 94 73.4
Peaxi162Scf00454g00414 Petunia axillaris HOM05D005435 ORTHO05D007370 7.5e-34 147.1 86 79.1
QL07p043269 Quercus lobata HOM05D005435 ORTHO05D007370 9.8e-34 146.7 94 72.3
CDE10G0836 Ceratophyllum demersum HOM05D005435 ORTHO05D007370 2.2e-33 145.6 97 71.1
QL07p043256 Quercus lobata HOM05D005435 ORTHO05D007370 3.7e-33 144.8 88 75.0
SEGI_35251 Sequoiadendron giganteum HOM05D005435 ORTHO05D007370 3.7e-33 144.8 94 72.3
Pp3c1_6360 Physcomitrium patens HOM05D005435 ORTHO05D007370 1.8e-32 142.5 90 74.4
CBR_g45330 Chara braunii HOM05D005435 ORTHO05D007370 2.4e-32 142.1 93 71.0
Pp3c7_24050 Physcomitrium patens HOM05D005435 ORTHO05D007370 4.6e-31 137.9 91 70.3
vmacro16401 Vaccinium macrocarpon HOM05D005435 ORTHO05D007370 1.7e-30 136.0 138 52.9
HPP92_007175 Vanilla planifolia HOM05D005435 ORTHO05D007370 2.3e-30 135.6 90 71.1
FAN16G2384 Fragaria x ananassa HOM05D005435 ORTHO05D007370 3.9e-30 134.8 134 53.7
Os02g0754700 Oryza sativa ssp. japonica HOM05D005435 ORTHO05D007370 3.9e-30 134.8 90 67.8
SMO201G0114 Selaginella moellendorffii HOM05D000113 ORTHO05D001108 8.6e-30 133.7 90 67.8
SMO268G0040 Selaginella moellendorffii HOM05D005435 ORTHO05D007370 1.1e-29 133.3 90 67.8
CAN.G1425.24 Capsicum annuum HOM05D005435 ORTHO05D007370 8.0e-28 127.1 74 81.1
Eucgr.K02931 Eucalyptus grandis HOM05D005435 ORTHO05D007370 4.0e-27 124.8 74 79.7
GSVIVG01025735001 Vitis vinifera HOM05D005435 ORTHO05D007370 6.8e-27 124.0 74 78.4
CiPaw.09G172100 Carya illinoinensis HOM05D005435 ORTHO05D007370 4.4e-26 121.3 74 78.4
MCO02G110 Micromonas commoda HOM05D005435 ORTHO05D007370 4.1e-24 114.8 90 57.8
MCO12G364 Micromonas commoda HOM05D005435 ORTHO05D007370 2.7e-23 112.1 74 71.6
PRCOL_00000347 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 3.5e-23 111.7 88 58.0
BcaC01g00217 Brassica carinata HOM05D005435 ORTHO05D007370 2.5e-21 105.5 94 57.4
PRCOL_00003807 Prasinoderma coloniale HOM05D005435 ORTHO05D007370 1.4e-19 99.8 74 63.5
CSS0000486 Camellia sinensis var. sinensis HOM05D005435 ORTHO05D007370 4.9e-17 91.3 93 53.8
CSS0050261 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-16 87.4 115 44.3
QL07p043263 Quercus lobata HOM05D005435 ORTHO05D007370 1.2e-15 86.7 62 69.4
Manes.09G066100 Manihot esculenta HOM05D005435 ORTHO05D007370 1.8e-11 72.8 69 55.1
Eucgr.E00010 Eucalyptus grandis HOM05D003637 ORTHO05D004175 6.6e-06 54.3 91 37.4


User provided reference genes

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