Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4666 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.3e-152 543.1 289 100.0
ECA238G4855 Erigeron canadensis HOM05D001243 ORTHO05D000843 9.2e-34 148.3 446 33.0
HanXRQChr10g0312951 Helianthus annuus HOM05D001243 ORTHO05D000843 4.6e-25 119.4 254 39.8
HanXRQChr14g0450571 Helianthus annuus HOM05D001243 ORTHO05D000843 7.8e-25 118.6 256 39.8
HanXRQChr08g0226741 Helianthus annuus HOM05D001243 ORTHO05D000843 2.5e-23 113.6 249 37.3
HanXRQChr08g0232091 Helianthus annuus HOM05D001243 ORTHO05D000843 2.1e-22 110.5 249 37.8
Lsat_1_v5_gn_3_73020 Lactuca sativa HOM05D001243 ORTHO05D000843 2.1e-22 110.5 256 37.5
Lsat_1_v5_gn_0_22301 Lactuca sativa HOM05D001243 ORTHO05D000843 1.1e-21 108.2 251 37.1
Lsat_1_v5_gn_2_71061 Lactuca sativa HOM05D001243 ORTHO05D000843 1.7e-19 100.9 254 34.3
ECA236G5075 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-18 97.4 196 39.3
ECA236G0138 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.2e-17 94.7 206 38.3
HanXRQChr01g0008401 Helianthus annuus HOM05D001243 ORTHO05D000843 6.8e-13 79.0 179 36.9
MSTRG.1529 Avicennia marina HOM05D000051 ORTHO05D000843 5.8e-12 75.9 276 29.7
MSTRG.25448 Avicennia marina HOM05D000051 ORTHO05D000843 7.6e-12 75.5 275 28.7
Oeu045163.1 Olea europaea HOM05D000051 ORTHO05D000843 2.9e-11 73.6 257 30.0
Migut.C01267 Erythranthe guttata HOM05D000051 ORTHO05D000843 6.4e-11 72.4 277 27.8
Psat7g104640 Pisum sativum HOM05D001243 ORTHO05D000843 8.4e-11 72.0 255 28.6
ECA236G3743 Erigeron canadensis HOM05D001243 ORTHO05D000843 1.9e-10 70.9 228 32.9
Oeu000543.1 Olea europaea HOM05D000051 ORTHO05D000843 1.9e-10 70.9 261 28.4
Ca_18444_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 4.6e-09 66.2 227 33.0
HanXRQChr11g0335991 Helianthus annuus HOM05D001243 ORTHO05D035137 4.6e-09 66.2 250 30.4
HanXRQChr07g0194121 Helianthus annuus HOM05D001243 ORTHO05D035137 6.0e-09 65.9 250 30.0
Nitab4.5_0006657g0020 Nicotiana tabacum HOM05D000051 ORTHO05D000843 6.0e-09 65.9 263 32.3
PSO478G4252 Papaver somniferum HOM05D000051 ORTHO05D000015 3.9e-08 63.2 270 27.8
Medtr3g023470 Medicago truncatula HOM05D001243 ORTHO05D000843 5.1e-08 62.8 261 28.4
SGA_v2.0_scaffold118G32502 Striga asiatica HOM05D000051 ORTHO05D000843 5.1e-08 62.8 273 25.3
Nitab4.5_0000303g0200 Nicotiana tabacum HOM05D000051 ORTHO05D000843 6.6e-08 62.4 266 32.0
Medtr4g047950 Medicago truncatula HOM05D001243 ORTHO05D000843 8.7e-08 62.0 258 28.3
Psat5g293000 Pisum sativum HOM05D001243 ORTHO05D000843 1.5e-07 61.2 116 37.9
arahy.Tifrunner.gnm1.ann1.ZEI2BD Arachis hypogaea HOM05D001243 ORTHO05D000843 1.9e-07 60.8 258 29.5
Dinv03144 Davidia involucrata HOM05D000051 ORTHO05D000843 1.9e-07 60.8 262 29.4
Dinv10495 Davidia involucrata HOM05D001243 ORTHO05D000843 2.5e-07 60.5 249 27.7
Glyma.13G224200 Glycine max HOM05D001243 ORTHO05D000843 2.5e-07 60.5 249 27.7
HanXRQChr14g0456121 Helianthus annuus HOM05D001243 ORTHO05D000843 3.3e-07 60.1 261 29.1
DCAR_029767 Daucus carota HOM05D001243 ORTHO05D000843 4.3e-07 59.7 113 40.7
Glyma.20G001100 Glycine max HOM05D001243 ORTHO05D000843 4.3e-07 59.7 259 29.3
Medtr5g066560 Medicago truncatula HOM05D001243 ORTHO05D000843 4.3e-07 59.7 253 29.6
arahy.Tifrunner.gnm1.ann1.FC16B5 Arachis hypogaea HOM05D001243 ORTHO05D000843 5.6e-07 59.3 258 29.5
VMungo0647G0298 Vigna mungo HOM05D001243 ORTHO05D000843 5.6e-07 59.3 260 30.4
Psat7g105120 Pisum sativum HOM05D001243 ORTHO05D000843 7.3e-07 58.9 122 32.0
HanXRQChr16g0521231 Helianthus annuus HOM05D001243 ORTHO05D000843 9.6e-07 58.5 262 27.5
Medtr7g017280 Medicago truncatula HOM05D001243 ORTHO05D000843 9.6e-07 58.5 259 25.9
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.3e-06 58.2 256 28.5
Migut.N03356 Erythranthe guttata HOM05D000051 ORTHO05D000843 1.3e-06 58.2 265 27.5
Medtr3g036330 Medicago truncatula HOM05D001243 ORTHO05D000843 1.3e-06 58.2 112 37.5
TPR.G6588 Trifolium pratense HOM05D001243 ORTHO05D000843 1.3e-06 58.2 228 28.9
Phvul.010G138000 Phaseolus vulgaris HOM05D001243 ORTHO05D000843 1.6e-06 57.8 121 39.7
VMungo0331G1212 Vigna mungo HOM05D001243 ORTHO05D000843 1.6e-06 57.8 121 39.7
Ca_01206_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 2.1e-06 57.4 116 37.9
Glyma.09G140200 Glycine max HOM05D001243 ORTHO05D000843 2.1e-06 57.4 252 29.4
HanXRQChr16g0522051 Helianthus annuus HOM05D001243 ORTHO05D000843 2.1e-06 57.4 243 28.4
Medtr3g463820 Medicago truncatula HOM05D001243 ORTHO05D000843 2.1e-06 57.4 259 27.8
HanXRQChr16g0521261 Helianthus annuus HOM05D001243 ORTHO05D000843 2.8e-06 57.0 257 26.1
Phvul.004G117200 Phaseolus vulgaris HOM05D001243 ORTHO05D000843 2.8e-06 57.0 259 26.6
PSO081G0167 Papaver somniferum HOM05D000051 ORTHO05D009405 3.6e-06 56.6 259 27.8
Glyma.05G234400 Glycine max HOM05D001243 ORTHO05D000843 4.8e-06 56.2 110 35.5
Glyma.09G142000 Glycine max HOM05D001243 ORTHO05D000843 4.8e-06 56.2 245 27.3
Medtr3g052940 Medicago truncatula HOM05D001243 ORTHO05D000843 4.8e-06 56.2 120 37.5
Lj3g0003539 Lotus japonicus HOM05D001243 ORTHO05D000843 6.2e-06 55.8 151 35.8
Dinv10494 Davidia involucrata HOM05D001243 ORTHO05D000843 8.1e-06 55.5 180 29.4
Phvul.004G117700 Phaseolus vulgaris HOM05D001243 ORTHO05D000843 8.1e-06 55.5 254 25.6


User provided reference genes

Program Settings