Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 4.7e-130 468.0 262 100.0
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 1.6e-77 293.5 172 80.8
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 5.3e-73 278.5 195 69.2
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 6.5e-71 271.6 166 74.7
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 2.5e-70 269.6 166 76.5
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.2e-70 269.2 166 76.5
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.2e-70 268.9 165 78.2
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 5.5e-70 268.5 165 78.2
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 2.7e-69 266.2 166 75.9
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 2.7e-69 266.2 165 77.0
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 3.6e-69 265.8 166 75.9
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 4.7e-69 265.4 166 75.3
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 4.7e-69 265.4 165 75.2
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 6.1e-69 265.0 164 78.0
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 8.0e-69 264.6 166 74.1
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 8.0e-69 264.6 168 74.4
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.0e-68 264.2 165 75.8
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.4e-68 263.8 165 75.2
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.8e-68 263.5 165 75.8
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.8e-68 263.5 165 75.8
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 1.8e-68 263.5 166 74.7
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 2.3e-68 263.1 165 75.8
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 2.3e-68 263.1 164 75.6
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 5.2e-68 261.9 168 72.0
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 5.2e-68 261.9 166 75.3
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 6.8e-68 261.5 165 74.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 6.8e-68 261.5 165 75.8
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 8.8e-68 261.2 166 73.5
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 8.8e-68 261.2 169 74.6
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 1.5e-67 260.4 169 72.8
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.5e-67 260.4 163 74.2
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.5e-67 260.4 164 76.8
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 2.0e-67 260.0 165 72.1
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.6e-67 259.6 166 74.7
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 3.4e-67 259.2 166 74.1
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.4e-67 259.2 165 73.9
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 4.4e-67 258.8 165 75.8
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 5.7e-67 258.5 163 74.8
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 9.7e-67 257.7 169 72.8
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.7e-66 256.9 166 74.1
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 2.2e-66 256.5 166 71.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 2.8e-66 256.1 167 74.9
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 2.8e-66 256.1 167 74.3
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 3.7e-66 255.8 166 74.1
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 6.3e-66 255.0 163 76.1
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 6.3e-66 255.0 166 73.5
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 6.3e-66 255.0 166 73.5
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 2.4e-65 253.1 166 71.7
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 3.1e-65 252.7 166 72.3
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.1e-65 252.7 167 74.3
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 4.1e-65 252.3 192 65.6
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 5.3e-65 251.9 172 74.4
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 5.3e-65 251.9 166 72.3
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 9.1e-65 251.1 170 70.6
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 2.0e-64 250.0 163 73.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 2.0e-64 250.0 174 67.2
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 3.5e-64 249.2 166 71.7
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 3.5e-64 249.2 164 71.3
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 6.5e-63 245.0 166 70.5
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.5e-62 243.8 161 72.0
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 2.5e-62 243.0 167 70.7
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.2e-61 240.7 163 69.9
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 4.7e-61 238.8 166 68.1
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 4.7e-61 238.8 204 61.3
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 8.0e-61 238.0 166 69.9
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 1.0e-60 237.7 165 67.9
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.0e-60 237.7 245 51.8
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.8e-60 236.9 163 69.9
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 2.3e-60 236.5 164 68.9
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.8e-60 235.0 166 69.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.8e-60 234.6 166 69.3
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.2e-59 234.2 163 69.3
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.2e-59 234.2 166 66.9
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 2.6e-59 233.0 180 64.4
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.4e-59 232.3 166 68.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 8.3e-58 228.0 147 72.8
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.1e-57 225.7 167 68.9
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 1.2e-56 224.2 137 78.1
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 1.6e-56 223.8 164 66.5
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 2.0e-56 223.4 140 74.3
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 2.9e-55 219.5 141 71.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 2.9e-55 219.5 139 74.8
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.5e-54 216.5 139 72.7
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.3e-52 209.9 201 55.2
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 6.8e-52 208.4 138 73.2
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.8e-50 203.0 129 74.4
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 1.4e-49 200.7 239 46.9
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 7.0e-49 198.4 136 69.9
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 7.0e-49 198.4 136 69.9
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 9.2e-49 198.0 147 65.3
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 5.8e-43 178.7 122 67.2
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 4.9e-42 175.6 122 68.0
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 2.4e-41 173.3 122 67.2
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 2.1e-37 160.2 183 44.8
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.8e-37 159.8 214 43.0
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 5.2e-36 155.6 148 49.3
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.1e-28 131.3 77 81.8
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.9e-26 122.5 74 74.3
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 3.5e-16 89.7 94 44.7
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.2e-09 66.6 87 54.0


User provided reference genes

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