Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 5.0e-174 614.4 319 100.0
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 3.9e-142 508.4 318 82.4
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 4.0e-139 498.4 315 81.6
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.5e-117 426.8 311 67.5
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.1e-115 420.6 311 67.5
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.8e-115 419.9 311 65.6
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.3e-113 413.7 311 65.3
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 8.7e-110 401.0 302 64.2
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 7.3e-109 397.9 311 64.3
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.1e-107 394.0 311 63.0
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.5e-106 390.2 311 62.4
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.6e-106 389.4 311 64.3
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 5.8e-106 388.3 311 60.5
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.3e-105 387.1 311 60.5
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 1.7e-105 386.7 311 63.3
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 3.8e-105 385.6 311 64.3
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 8.4e-105 384.4 311 62.4
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.1e-104 384.0 311 61.4
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.4e-104 383.6 311 61.1
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 4.2e-104 382.1 304 61.5
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 5.4e-104 381.7 305 61.0
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 7.1e-104 381.3 322 60.9
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.0e-102 377.5 311 61.4
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.3e-102 377.1 311 60.1
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 2.3e-102 376.3 302 59.9
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 5.6e-101 371.7 306 62.1
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 7.4e-101 371.3 311 59.2
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 9.6e-101 370.9 302 61.6
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.6e-100 370.2 311 60.1
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.6e-100 370.2 311 59.2
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 2.1e-100 369.8 311 58.8
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.4e-99 367.1 305 60.0
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.4e-99 366.3 311 58.2
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 3.1e-99 365.9 305 58.4
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 6.9e-99 364.8 305 58.0
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.2e-98 364.0 311 59.2
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.6e-98 362.8 305 59.3
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.6e-98 362.8 305 58.0
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.6e-98 362.8 311 60.1
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.4e-98 362.5 311 57.9
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.5e-98 362.1 305 58.0
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 4.5e-98 362.1 310 59.4
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 7.6e-98 361.3 311 58.5
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.3e-97 360.5 313 58.5
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.2e-97 359.8 305 57.7
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 6.5e-97 358.2 311 58.5
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 8.4e-97 357.8 302 59.6
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 8.4e-97 357.8 302 59.6
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.1e-96 357.5 311 57.6
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 1.2e-95 354.0 311 56.6
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.7e-95 352.8 305 57.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.5e-95 352.4 305 58.4
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 4.3e-93 345.5 271 63.1
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.3e-92 344.0 302 56.6
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.3e-92 344.0 300 58.7
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.6e-92 343.6 311 56.3
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 2.8e-92 342.8 433 46.0
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 3.1e-91 339.3 300 54.0
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 6.9e-91 338.2 311 55.6
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 9.0e-91 337.8 302 55.0
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 2.0e-90 336.7 301 56.5
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 1.1e-88 330.9 356 51.1
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 7.2e-88 328.2 292 56.8
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 6.1e-87 325.1 302 54.0
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.0e-86 324.3 292 55.8
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.3e-86 323.9 304 53.9
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 1.8e-86 323.6 357 49.6
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 3.7e-84 315.8 362 49.2
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.4e-80 303.9 250 61.6
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 1.9e-80 303.5 312 50.6
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 4.2e-80 302.4 294 52.0
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 1.6e-79 300.4 298 56.4
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 6.1e-79 298.5 306 49.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 5.1e-78 295.4 312 49.0
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 2.0e-77 293.5 312 48.7
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 2.0e-77 293.5 312 48.7
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.7e-77 292.0 266 57.9
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 5.7e-77 292.0 312 49.0
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.8e-76 289.7 266 57.1
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 4.8e-76 288.9 241 60.2
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 4.1e-75 285.8 312 47.8
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 5.3e-75 285.4 238 58.8
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 2.0e-74 283.5 318 46.9
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 4.5e-74 282.3 244 56.6
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 4.5e-74 282.3 321 48.9
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.0e-73 281.2 300 49.0
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 2.2e-73 280.0 293 48.5
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.5e-73 278.5 312 45.5
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 8.5e-73 278.1 314 48.7
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 4.2e-72 275.8 312 46.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 5.5e-72 275.4 295 49.2
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 2.1e-71 273.5 312 44.9
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 6.1e-71 271.9 312 45.8
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 3.3e-69 266.2 222 61.7
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 7.4e-69 265.0 241 57.3
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 9.7e-69 264.6 292 45.2
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 1.4e-67 260.8 215 62.8
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.6e-63 247.3 237 54.9
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 4.8e-60 235.7 299 44.1
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.4e-59 234.2 178 64.6
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 6.5e-49 198.7 242 43.8
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 8.8e-46 188.3 294 34.7
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 5.7e-45 185.7 240 43.8
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.7e-39 166.0 112 68.8
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 3.4e-29 133.3 272 27.2
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.8e-26 122.1 113 55.8
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.2e-23 114.8 62 82.3
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 6.2e-23 112.5 71 74.6
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.1e-22 111.7 71 74.6
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 2.6e-21 107.1 62 77.4
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 4.6e-18 96.3 62 64.5
Lsat_1_v5_gn_4_175920 Lactuca sativa HOM05D001061 ORTHO05D006808 2.3e-09 67.4 49 65.3
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 4.7e-07 59.7 62 48.4


User provided reference genes

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