Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 4.6e-171 604.4 286 100.0
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 6.5e-133 477.6 275 80.0
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.7e-125 453.0 279 76.7
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 4.9e-112 408.3 276 69.2
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.5e-108 396.0 274 66.4
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 5.6e-108 394.8 270 65.9
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 7.3e-108 394.4 268 67.2
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.2e-107 393.7 273 67.4
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 1.6e-107 393.3 273 64.8
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 4.7e-107 391.7 273 67.0
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 6.2e-107 391.3 274 67.5
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 2.3e-106 389.4 283 65.0
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.4e-103 380.2 278 62.6
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.4e-103 380.2 278 64.7
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.9e-103 379.8 278 62.2
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 2.4e-103 379.4 274 64.6
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 3.2e-103 379.0 274 63.9
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 4.1e-103 378.6 270 64.4
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 5.4e-103 378.3 273 64.8
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 1.2e-102 377.1 270 63.3
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 3.5e-102 375.6 274 62.0
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 3.9e-101 372.1 270 64.1
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 5.1e-101 371.7 276 61.2
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 5.1e-101 371.7 270 64.1
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 8.6e-101 370.9 264 65.2
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.5e-100 369.4 274 62.0
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 5.6e-100 368.2 270 62.2
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 1.6e-99 366.7 270 64.1
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 8.1e-99 364.4 270 62.2
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.4e-98 363.6 277 62.1
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 2.3e-98 362.8 294 60.2
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 5.2e-98 361.7 270 61.9
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 2.6e-97 359.4 278 61.5
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 2.6e-97 359.4 271 62.4
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.7e-96 356.7 276 59.1
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 3.7e-96 355.5 272 58.8
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 1.1e-95 354.0 278 61.5
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 1.1e-95 354.0 270 61.5
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 3.2e-95 352.4 275 60.0
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 1.3e-93 347.1 277 59.6
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 3.9e-93 345.5 276 59.1
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 5.1e-93 345.1 282 56.7
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 4.3e-92 342.0 268 58.6
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.3e-92 342.0 279 58.1
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 9.6e-92 340.9 268 58.2
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 1.6e-91 340.1 270 59.3
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 2.8e-91 339.3 273 56.4
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 1.1e-90 337.4 268 57.8
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.4e-90 337.0 276 58.3
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.5e-89 333.6 270 58.9
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 2.6e-89 332.8 224 67.4
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 1.3e-88 330.5 275 57.1
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 4.9e-88 328.6 270 55.6
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 9.3e-87 324.3 288 55.6
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 4.6e-86 322.0 270 57.8
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.0e-85 320.9 283 56.2
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 1.7e-85 320.1 279 55.2
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 1.7e-85 320.1 279 55.2
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.7e-85 320.1 279 55.2
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 5.1e-85 318.5 276 54.0
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 6.6e-85 318.2 228 64.9
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 6.6e-85 318.2 224 66.5
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 4.3e-84 315.5 286 54.2
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 6.2e-83 311.6 221 65.2
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 1.8e-82 310.1 307 51.8
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 5.3e-82 308.5 273 53.8
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 2.0e-81 306.6 269 53.5
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 3.4e-81 305.8 282 53.9
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.3e-80 303.9 267 51.7
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 6.4e-80 301.6 239 59.4
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 1.0e-77 294.3 267 50.6
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.3e-75 287.3 273 52.7
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 2.8e-75 286.2 318 47.5
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 2.9e-72 276.2 229 55.9
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.4e-71 273.9 182 70.9
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 3.9e-69 265.8 240 51.7
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 2.8e-67 259.6 327 43.7
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 3.1e-66 256.1 184 62.0
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 8.4e-64 248.1 275 44.4
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 8.7e-61 238.0 188 60.1
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 9.6e-60 234.6 280 41.8
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.6e-59 233.8 160 69.4
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.8e-59 232.3 184 58.7
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 4.1e-58 229.2 178 60.7
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 2.6e-57 226.5 170 63.5
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 8.2e-51 204.9 235 44.7
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 4.1e-50 202.6 247 42.5
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 6.9e-50 201.8 278 42.1
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 4.6e-46 189.1 148 63.5
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 4.4e-44 182.6 278 34.9
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.3e-43 181.0 138 55.8
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.0e-40 171.4 134 57.5
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.2e-39 166.0 129 58.1
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 4.2e-39 166.0 130 60.0
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.3e-35 154.5 311 32.8
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 9.7e-28 128.3 83 69.9
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 3.5e-25 119.8 123 52.0
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 4.0e-21 106.3 168 36.9
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 5.7e-20 102.4 128 42.2
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 8.3e-11 72.0 84 44.0
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 4.1e-10 69.7 184 27.7
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 5.4e-10 69.3 184 27.7
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 3.5e-09 66.6 256 23.0
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 5.9e-09 65.9 222 27.0
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 1.0e-08 65.1 241 24.9
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 1.3e-08 64.7 224 25.9
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.3e-08 64.7 38 65.8
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 1.3e-08 64.7 223 27.8
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 2.3e-08 63.9 210 27.1
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 2.9e-08 63.5 222 24.8
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 5.0e-08 62.8 217 26.7
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 6.6e-08 62.4 222 22.5
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 8.6e-08 62.0 203 27.6
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 1.5e-07 61.2 232 27.2
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 1.9e-07 60.8 191 26.2
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.9e-07 60.8 75 42.7
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 3.3e-07 60.1 220 28.2
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 3.3e-07 60.1 159 26.4
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 4.3e-07 59.7 226 23.5
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.6e-07 59.3 39 64.1
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 5.6e-07 59.3 213 27.2
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 7.3e-07 58.9 223 24.7
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 7.3e-07 58.9 201 27.9
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 7.3e-07 58.9 175 25.1
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 9.5e-07 58.5 243 25.9
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 9.5e-07 58.5 212 25.5
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 1.2e-06 58.2 188 26.1
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 1.2e-06 58.2 227 25.1
HanXRQChr08g0212801 Helianthus annuus HOM05D005118 ORTHO05D006038 1.2e-06 58.2 224 24.1
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 1.6e-06 57.8 223 26.0
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 2.1e-06 57.4 159 26.4
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.1e-06 57.4 227 25.1
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 2.1e-06 57.4 161 27.3
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 2.1e-06 57.4 224 24.6
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 2.1e-06 57.4 225 24.9
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.8e-06 57.0 230 24.8
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 3.6e-06 56.6 170 28.8
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 3.6e-06 56.6 246 24.8
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 3.6e-06 56.6 54 50.0
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 4.7e-06 56.2 163 28.2
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 4.7e-06 56.2 230 23.5
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 4.7e-06 56.2 230 24.8
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 4.7e-06 56.2 158 27.8
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 6.1e-06 55.8 220 25.0
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 6.1e-06 55.8 159 24.5


User provided reference genes

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