Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4396 Erigeron canadensis HOM05D007502 ORTHO05D010230 1.4e-88 329.7 177 100.0
Lsat_1_v5_gn_2_82580 Lactuca sativa HOM05D007502 ORTHO05D010230 2.6e-31 139.4 184 52.7
Lsat_1_v5_gn_5_174300 Lactuca sativa HOM05D007502 ORTHO05D010230 1.6e-17 93.6 120 50.0
CSS0024819 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 6.2e-17 91.7 173 42.2
HanXRQChr01g0002171 Helianthus annuus HOM05D007502 ORTHO05D010230 5.3e-16 88.6 148 47.3
MD15G1299000 Malus domestica HOM05D007502 ORTHO05D010230 1.1e-13 80.9 163 41.7
vmacro05426 Vaccinium macrocarpon HOM05D007502 ORTHO05D010230 3.2e-13 79.3 166 40.4
Prupe.6G218900 Prunus persica HOM05D007502 ORTHO05D010230 1.0e-11 74.3 176 36.9
CSS0004026 Camellia sinensis var. sinensis HOM05D007502 ORTHO05D010230 1.1e-10 70.9 147 40.8
DCAR_025816 Daucus carota HOM05D007502 ORTHO05D010230 4.3e-10 68.9 165 37.0
Solyc02g092200.3 Solanum lycopersicum HOM05D007502 ORTHO05D010230 7.4e-10 68.2 163 36.2
RcHm_v2.0_Chr2g0108411 Rosa chinensis HOM05D007502 ORTHO05D010230 1.3e-09 67.4 164 39.6
Cc07_g07260 Coffea canephora HOM05D007502 ORTHO05D010230 2.8e-09 66.2 152 37.5
Sopen02g036770 Solanum pennellii HOM05D007502 ORTHO05D010230 4.8e-09 65.5 165 35.2
C03p59700 Brassica napus HOM05D007502 ORTHO05D011692 1.1e-08 64.3 180 35.6
BolC3t18232H Brassica oleracea HOM05D007502 ORTHO05D011692 1.1e-08 64.3 180 35.6
QL06p039372 Quercus lobata HOM05D007502 ORTHO05D010230 1.1e-08 64.3 159 30.8
Cfa004764 Carpinus fangiana HOM05D007502 ORTHO05D010230 3.1e-08 62.8 172 33.7
Thhalv10005075m.g Eutrema salsugineum HOM05D007502 ORTHO05D010230 3.1e-08 62.8 141 36.2
arahy.Tifrunner.gnm1.ann1.69I0H7 Arachis hypogaea HOM05D007502 ORTHO05D010230 4.1e-08 62.4 175 33.1
PGSC0003DMG401021412 Solanum tuberosum HOM05D007502 ORTHO05D010230 4.1e-08 62.4 154 37.0
BraA06t26210Z Brassica rapa HOM05D007502 ORTHO05D011692 9.0e-08 61.2 178 36.5
Cpa.g.c26343.2 Carica papaya HOM05D007502 ORTHO05D010230 9.0e-08 61.2 187 29.4
Lj2g0008607 Lotus japonicus HOM05D007502 ORTHO05D010230 1.2e-07 60.8 176 32.4
RhsimUnG0241800 Rhododendron simsii HOM05D007502 ORTHO05D010230 1.2e-07 60.8 126 40.5
Lsat_1_v5_gn_4_132041 Lactuca sativa HOM05D007502 ORTHO05D010230 2.0e-07 60.1 77 53.2
Glyma.11G046600 Glycine max HOM05D007502 ORTHO05D010230 5.9e-07 58.5 164 34.8
GSVIVG01002329001 Vitis vinifera HOM05D007502 ORTHO05D010230 5.9e-07 58.5 171 35.7
CDE06G1988 Ceratophyllum demersum HOM05D007502 ORTHO05D010230 7.7e-07 58.2 105 42.9
MSTRG.3478 Avicennia marina HOM05D007502 ORTHO05D010230 1.0e-06 57.8 130 39.2
Lalb_Chr05g0213781 Lupinus albus HOM05D007502 ORTHO05D010230 1.7e-06 57.0 182 33.5
Haze_10361 Corylus avellana HOM05D007502 ORTHO05D010230 2.2e-06 56.6 88 50.0
BcaB02g09909 Brassica carinata HOM05D007502 ORTHO05D010230 2.9e-06 56.2 189 33.9
Ciclev10027603m.g Citrus clementina HOM05D007502 ORTHO05D010230 3.8e-06 55.8 171 35.1
Gorai.007G225000 Gossypium raimondii HOM05D007502 ORTHO05D010230 3.8e-06 55.8 169 32.5
Medtr5g015230 Medicago truncatula HOM05D007502 ORTHO05D010230 3.8e-06 55.8 167 32.3
SalBow5G4540 Salvia bowleyana HOM05D007502 ORTHO05D010230 5.0e-06 55.5 111 45.9


User provided reference genes

Program Settings