Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 4.5e-269 930.6 451 100.0
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.0e-204 716.8 453 77.9
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 4.4e-192 674.9 432 76.4
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.3e-180 636.7 432 71.3
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.2e-175 619.4 458 65.5
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.9e-175 619.0 426 69.2
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.6e-173 613.2 427 67.7
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.6e-173 611.7 427 66.7
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 4.6e-173 611.7 427 69.1
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 7.8e-173 610.9 429 67.6
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 3.9e-172 608.6 433 65.8
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 6.6e-172 607.8 429 67.6
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 6.6e-172 607.8 394 71.8
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.5e-171 606.7 429 67.6
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.9e-171 606.3 432 66.4
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 5.6e-171 604.7 431 67.5
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.2e-170 603.6 429 66.2
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 4.7e-170 601.7 431 66.1
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.7e-170 601.7 454 63.9
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.1e-169 599.0 426 67.1
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.0e-169 598.6 454 63.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 6.8e-169 597.8 427 66.0
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 8.9e-169 597.4 402 70.6
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 5.8e-168 594.7 437 66.6
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.3e-167 593.6 426 66.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.1e-166 590.5 424 64.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 2.4e-166 589.3 432 65.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.4e-166 588.2 441 64.2
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.6e-165 586.6 427 63.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.6e-165 586.6 429 65.5
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 2.7e-165 585.9 429 66.0
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 2.7e-165 585.9 427 65.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 1.0e-164 583.9 428 66.1
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.0e-164 583.9 423 64.3
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.3e-164 583.6 443 63.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.7e-164 583.2 429 65.3
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.3e-164 582.8 453 61.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.0e-164 582.4 418 65.1
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.1e-164 581.6 422 64.5
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.6e-164 581.3 397 68.3
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 8.7e-164 580.9 427 64.6
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 8.7e-164 580.9 427 64.6
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.1e-163 580.5 406 65.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-163 580.1 451 62.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.5e-163 579.3 403 67.5
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 3.3e-163 578.9 433 64.4
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 5.6e-163 578.2 446 62.8
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.3e-163 577.8 429 65.0
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 9.6e-163 577.4 443 63.7
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 9.6e-163 577.4 421 64.1
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.2e-162 577.0 427 64.4
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.6e-162 576.6 427 63.9
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 2.1e-162 576.2 411 64.7
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.6e-162 575.5 458 62.7
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 6.2e-162 574.7 428 63.3
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 3.1e-161 572.4 454 62.6
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 5.8e-160 568.2 428 64.5
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 9.3e-158 560.8 489 58.7
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.1e-157 559.7 410 64.1
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.0e-156 557.4 442 60.4
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.5e-155 552.7 416 61.5
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 7.3e-155 551.2 423 62.9
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 9.6e-155 550.8 392 63.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.6e-154 548.9 392 63.5
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 3.6e-154 548.9 355 71.0
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 6.2e-154 548.1 459 59.3
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 5.3e-153 545.0 439 62.0
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.3e-151 540.4 435 61.4
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.3e-147 525.4 401 63.6
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.1e-145 519.2 427 58.8
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.5e-144 515.4 429 59.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 7.6e-144 514.6 454 57.0
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.2e-143 513.1 447 58.8
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-142 510.8 446 57.8
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 6.0e-141 505.0 464 56.9
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.9e-139 500.0 404 59.9
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.0e-135 487.6 418 56.7
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 6.5e-135 485.0 426 54.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.1e-134 484.2 361 64.5
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 4.2e-134 482.3 333 70.6
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.2e-133 480.7 316 69.0
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 6.7e-132 474.9 356 65.7
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 2.5e-131 473.0 428 54.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 3.4e-128 462.6 411 54.3
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 7.7e-128 461.5 413 54.5
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-126 457.6 393 58.8
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.1e-126 457.6 337 64.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.2e-126 455.7 405 57.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 5.5e-126 455.3 338 62.7
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.5e-123 446.4 335 64.2
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.3e-123 446.0 354 60.7
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.3e-123 445.7 372 59.7
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 3.8e-119 432.6 457 47.7
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.4e-97 360.1 228 71.9
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 4.1e-89 332.8 204 74.0
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 5.2e-76 289.3 242 59.9
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 7.8e-72 275.4 198 62.6
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 6.0e-64 249.2 251 52.2
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.6e-56 224.6 380 35.8
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.9e-51 205.3 130 74.6
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.9e-51 205.3 130 74.6
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 5.1e-47 193.0 162 58.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 8.1e-45 185.7 352 34.1
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.8e-44 184.5 170 56.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-30 138.7 142 52.1
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-30 138.7 142 52.1
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 7.4e-30 136.0 137 49.6
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.4e-28 131.0 70 85.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 5.1e-23 113.2 122 50.0
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.4e-22 109.4 63 79.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 9.0e-20 102.4 76 63.2
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 8.7e-15 85.9 502 23.1
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.5e-14 85.1 205 28.8
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 3.1e-12 77.4 235 26.8
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.1e-12 77.4 75 50.7
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 2.2e-10 71.2 555 19.1
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.4e-07 62.0 77 41.6


User provided reference genes

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