Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 3.6e-104 381.7 208 100.0
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 5.0e-58 228.4 207 64.7
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 3.9e-42 175.6 189 57.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 1.2e-38 164.1 188 53.7
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.4e-36 157.1 186 55.9
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 3.2e-36 156.0 213 49.3
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.2e-36 156.0 178 52.8
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 9.2e-36 154.5 195 49.2
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.9e-34 149.1 200 50.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 8.6e-34 147.9 197 48.2
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.1e-33 147.5 179 50.3
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.1e-33 147.5 197 48.7
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.3e-33 146.0 143 53.1
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 3.3e-33 146.0 187 48.1
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 5.6e-33 145.2 199 48.2
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 7.3e-33 144.8 197 47.7
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.6e-32 142.5 190 51.1
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.8e-31 140.2 200 48.5
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 3.1e-31 139.4 212 46.2
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 5.2e-31 138.7 203 47.3
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 5.2e-31 138.7 187 49.7
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 6.8e-31 138.3 195 47.7
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 6.8e-31 138.3 202 45.5
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 8.9e-31 137.9 205 45.9
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.2e-30 137.5 200 46.5
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 1.5e-30 137.1 199 49.2
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.0e-30 136.7 180 48.9
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 2.6e-30 136.3 200 48.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.6e-30 134.8 178 47.8
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.2e-29 133.3 180 48.3
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 4.9e-29 132.1 196 46.9
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 4.9e-29 132.1 178 46.1
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 4.9e-29 132.1 183 48.1
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 4.9e-29 132.1 181 48.6
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 6.4e-29 131.7 202 41.6
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 6.4e-29 131.7 202 41.1
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 8.4e-29 131.3 185 47.0
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.1e-28 131.0 185 47.0
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.1e-28 131.0 207 44.4
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.1e-28 131.0 202 41.6
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 3.2e-28 129.4 185 46.5
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 4.2e-28 129.0 179 46.4
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 5.4e-28 128.6 205 41.0
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 7.1e-28 128.3 196 46.4
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 7.1e-28 128.3 170 47.1
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.1e-27 126.7 192 47.9
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.1e-27 126.7 150 50.0
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.7e-27 126.3 185 45.9
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 4.6e-27 125.6 171 45.0
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 7.8e-27 124.8 177 47.5
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 7.8e-27 124.8 181 47.0
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 1.7e-26 123.6 196 42.3
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.7e-26 123.6 196 42.3
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.3e-26 123.2 190 43.2
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.3e-26 123.2 146 47.3
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 3.0e-26 122.9 182 46.2
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 3.0e-26 122.9 182 46.2
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.1e-25 120.9 199 44.2
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 1.5e-25 120.6 172 43.0
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.5e-25 120.6 197 44.7
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 9.6e-25 117.9 238 39.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.8e-24 116.3 177 45.2
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 6.2e-24 115.2 194 40.7
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 6.2e-24 115.2 182 45.6
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 8.1e-24 114.8 158 44.3
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 8.1e-24 114.8 184 41.8
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.4e-23 114.0 174 41.4
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.8e-23 113.6 177 44.6
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.8e-23 113.6 176 42.0
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 1.8e-23 113.6 200 42.5
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 2.4e-23 113.2 208 42.8
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.4e-23 113.2 221 40.7
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 4.0e-23 112.5 153 43.8
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 5.3e-23 112.1 184 42.4
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.5e-22 110.5 172 44.8
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 9.9e-22 107.8 195 43.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.7e-21 107.1 182 41.8
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.8e-21 105.9 191 40.3
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 6.4e-21 105.1 176 42.6
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 6.4e-21 105.1 234 38.9
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 5.4e-20 102.1 189 41.8
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 7.1e-20 101.7 180 42.8
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 7.1e-20 101.7 161 42.9
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.1e-19 100.1 185 42.7
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.7e-19 99.8 198 39.4
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 6.0e-19 98.6 190 41.6
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 7.8e-19 98.2 190 37.9
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 7.8e-19 98.2 118 54.2
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 5.1e-18 95.5 186 41.4
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 6.6e-18 95.1 188 37.2
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 6.6e-18 95.1 186 41.4
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 8.7e-18 94.7 195 40.0
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 8.7e-18 94.7 187 40.1
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.9e-17 93.6 186 40.9
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 1.9e-17 93.6 194 38.1
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 4.3e-17 92.4 188 41.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 1.3e-16 90.9 183 38.3
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 1.6e-16 90.5 202 38.1
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.1e-16 90.1 188 39.4
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.6e-16 89.4 192 37.5
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 4.8e-16 89.0 143 42.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 6.2e-16 88.6 189 40.7
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 8.1e-16 88.2 143 42.0
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 2.4e-15 86.7 191 38.7
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 4.0e-15 85.9 186 39.2
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.7e-13 80.5 178 39.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 2.4e-12 76.6 136 45.6
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 4.2e-12 75.9 95 45.3
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 1.6e-11 73.9 183 32.8
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 2.1e-11 73.6 178 36.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 2.1e-11 73.6 144 37.5
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 4.6e-11 72.4 71 53.5
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 4.6e-11 72.4 188 36.7
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.0e-11 72.0 189 36.5
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 1.0e-10 71.2 177 32.2
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 3.9e-10 69.3 176 34.7
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 6.7e-10 68.6 137 38.0
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.5e-09 67.4 137 37.2
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 1.5e-09 67.4 148 31.1
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 1.9e-09 67.0 232 29.7
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 8.1e-08 61.6 61 50.8
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 8.1e-08 61.6 123 36.6


User provided reference genes

Program Settings