Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 9.2e-105 383.6 205 100.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 4.5e-83 311.6 205 82.0
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 3.9e-79 298.5 202 78.7
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 4.2e-73 278.5 209 73.2
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.5e-70 270.0 209 70.3
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.3e-70 268.5 209 69.9
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 5.6e-70 268.1 212 68.9
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.3e-69 266.9 208 69.2
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 6.2e-69 264.6 210 69.5
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 6.2e-69 264.6 209 68.9
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.4e-68 263.5 208 68.8
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.8e-68 263.1 219 68.0
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 4.0e-68 261.9 179 76.5
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.2e-67 260.4 209 69.4
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 1.5e-67 260.0 216 69.0
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.0e-66 257.3 209 68.4
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 2.2e-66 256.1 212 66.5
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 3.8e-66 255.4 211 66.4
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 6.5e-66 254.6 207 68.1
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.1e-65 253.8 231 63.6
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.9e-65 253.1 209 65.6
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.9e-65 253.1 209 65.6
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 5.5e-65 251.5 207 67.1
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 7.1e-65 251.1 209 64.6
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 7.1e-65 251.1 215 65.1
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 7.1e-65 251.1 223 64.6
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 1.2e-64 250.4 222 62.6
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.8e-63 246.5 214 62.6
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 3.0e-63 245.7 214 63.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 3.0e-63 245.7 207 65.7
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 3.9e-63 245.4 207 65.2
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 3.9e-63 245.4 214 63.6
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 5.1e-63 245.0 207 65.2
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.1e-63 245.0 211 64.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 6.7e-63 244.6 208 65.9
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 8.7e-63 244.2 214 63.1
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 8.7e-63 244.2 208 65.9
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.5e-62 243.4 224 63.4
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 1.9e-62 243.0 236 60.2
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.9e-62 243.0 216 63.4
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 3.3e-62 242.3 217 63.1
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 4.3e-62 241.9 214 62.6
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 5.7e-62 241.5 170 75.9
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 7.4e-62 241.1 207 65.7
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 7.4e-62 241.1 183 68.9
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.3e-61 240.4 206 66.0
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.3e-61 240.4 214 62.1
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 2.8e-61 239.2 209 63.6
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.8e-61 239.2 195 65.1
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.8e-61 239.2 208 63.9
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 4.8e-61 238.4 214 62.6
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 6.3e-61 238.0 208 65.4
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 8.2e-61 237.7 200 64.5
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.1e-60 237.3 220 60.5
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.1e-60 237.3 212 63.2
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.4e-60 236.9 206 65.0
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.4e-60 236.9 208 63.9
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.4e-60 236.9 195 64.6
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 3.1e-60 235.7 217 62.2
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 3.1e-60 235.7 208 63.0
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 4.1e-60 235.3 194 68.0
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 5.3e-60 235.0 180 68.3
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 9.0e-60 234.2 212 61.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 9.0e-60 234.2 200 68.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 1.5e-59 233.4 220 60.9
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.5e-59 233.4 200 61.5
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 2.0e-59 233.0 213 60.1
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.6e-59 232.6 142 83.8
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.5e-59 231.9 218 60.1
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 4.5e-59 231.9 206 65.0
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.3e-58 230.3 205 61.5
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.7e-58 229.9 159 74.2
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.7e-58 229.9 159 74.8
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.8e-58 228.8 226 57.5
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-57 226.9 156 75.0
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.5e-57 226.1 146 79.5
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 4.6e-56 221.9 183 63.4
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 4.6e-56 221.9 208 60.1
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 1.0e-55 220.7 206 63.6
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.8e-55 219.9 210 60.5
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.3e-55 219.5 206 63.1
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.9e-55 218.8 155 72.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 3.3e-54 215.7 200 61.0
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 4.3e-54 215.3 158 72.2
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 9.7e-54 214.2 183 62.8
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.3e-53 213.8 157 72.0
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.2e-53 213.0 216 59.3
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 2.2e-53 213.0 143 77.6
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 3.7e-53 212.2 221 56.1
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.2e-51 207.2 146 70.5
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.5e-51 206.8 143 76.2
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 2.6e-51 206.1 146 71.2
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.4e-49 200.3 206 59.2
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 6.1e-48 194.9 166 63.3
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 3.0e-47 192.6 156 65.4
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 3.7e-45 185.7 122 79.5
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.1e-44 182.2 212 52.8
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.2e-43 180.6 157 59.2
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 1.7e-42 176.8 186 52.2
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 3.2e-41 172.6 194 55.2
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 9.7e-38 161.0 184 51.6
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 3.5e-35 152.5 172 49.4
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.5e-33 147.1 146 59.6
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 2.7e-32 142.9 90 78.9
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 5.7e-30 135.2 190 44.7
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 8.2e-29 131.3 81 81.5
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.8e-28 130.2 79 82.3
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 6.5e-26 121.7 179 43.0
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.4e-25 117.9 127 54.3
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.2e-21 106.7 72 76.4
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 8.3e-21 104.8 118 51.7
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 4.1e-20 102.4 170 41.2
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 3.8e-18 95.9 97 55.7
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.6e-16 89.4 72 63.9
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 8.8e-15 84.7 244 30.3
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.2e-13 80.1 64 65.6
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 7.0e-12 75.1 56 66.1
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.2e-11 74.3 99 46.5
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 3.6e-08 62.8 66 47.0
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 2.3e-07 60.1 100 38.0
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.6e-06 56.6 72 48.6
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.4e-06 56.2 75 49.3


User provided reference genes

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