Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 0.0e+00 1466.8 784 100.0
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 0.0e+00 1123.6 702 86.0
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 2.0e-293 1012.3 710 79.6
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 4.4e-280 968.0 719 73.0
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 1.8e-278 962.6 719 73.4
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 4.5e-277 958.0 723 72.5
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 1.3e-276 956.4 723 72.3
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 5.0e-276 954.5 720 72.4
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 8.5e-276 953.7 725 70.8
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 4.7e-274 948.0 724 70.9
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 4.0e-273 944.9 725 70.9
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 9.8e-272 940.3 724 69.8
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 2.8e-271 938.7 772 68.3
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 1.2e-269 933.3 713 70.5
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 2.7e-269 932.2 710 70.3
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 3.5e-269 931.8 719 69.1
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 1.3e-268 929.9 711 70.6
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 3.8e-268 928.3 705 73.0
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 8.6e-268 927.2 724 68.8
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 1.9e-267 926.0 713 69.3
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 4.2e-267 924.9 729 68.6
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 5.5e-267 924.5 712 69.2
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 7.2e-267 924.1 719 70.2
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.1e-266 922.5 711 69.9
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 4.7e-266 921.4 712 70.1
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 1.8e-265 919.5 712 70.5
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.3e-265 919.1 729 68.2
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 2.3e-265 919.1 729 68.2
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 1.2e-264 916.8 710 70.0
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 5.7e-264 914.4 711 69.5
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 7.5e-264 914.1 711 70.0
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 4.9e-263 911.4 719 69.1
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 2.4e-262 909.1 712 69.2
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 7.0e-262 907.5 724 67.7
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 7.0e-262 907.5 721 68.1
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.0e-260 903.7 729 67.1
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 1.1e-259 900.2 730 67.5
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 1.9e-259 899.4 712 69.2
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 7.3e-259 897.5 715 68.8
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.2e-258 896.7 716 67.2
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 6.1e-258 894.4 735 66.9
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 1.4e-257 893.3 710 69.2
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.8e-257 892.9 711 68.6
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 4.0e-257 891.7 724 68.6
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 5.2e-257 891.3 726 67.5
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 1.2e-256 890.2 702 70.1
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 3.4e-256 888.6 725 67.0
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 5.8e-256 887.9 712 68.8
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 7.5e-256 887.5 712 68.7
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 7.5e-256 887.5 712 68.8
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 7.5e-256 887.5 724 67.0
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.3e-255 886.7 711 66.7
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 1.3e-255 886.7 709 67.8
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 1.7e-255 886.3 716 68.2
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.2e-255 885.9 711 67.7
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 2.2e-255 885.9 717 66.9
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 2.9e-255 885.6 716 66.8
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 6.4e-255 884.4 711 67.8
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 1.1e-254 883.6 711 66.7
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 1.1e-254 883.6 712 68.7
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 1.9e-254 882.9 711 68.2
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 3.2e-254 882.1 711 68.2
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 4.1e-254 881.7 719 68.3
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 5.4e-254 881.3 715 68.7
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 7.0e-254 880.9 726 66.5
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.0e-253 879.4 726 67.1
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 2.7e-253 879.0 714 67.6
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 2.7e-253 879.0 711 68.8
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 6.0e-253 877.9 715 67.8
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 7.8e-253 877.5 724 68.0
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.3e-252 876.7 680 70.3
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 3.0e-252 875.5 710 68.5
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 5.0e-252 874.8 721 67.3
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 2.5e-251 872.5 702 67.1
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 2.8e-250 869.0 724 65.7
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 2.8e-250 869.0 717 66.8
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 3.1e-249 865.5 723 65.7
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 4.0e-249 865.1 724 66.0
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 6.8e-249 864.4 723 65.4
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 6.8e-249 864.4 710 67.0
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.2e-248 863.6 691 68.2
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.2e-248 863.6 691 68.2
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 2.0e-248 862.8 719 66.9
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 4.4e-248 861.7 717 66.5
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 4.4e-248 861.7 723 67.1
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 7.5e-248 860.9 717 66.2
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 1.3e-247 860.1 724 65.5
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 1.7e-247 859.8 721 66.6
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 8.3e-247 857.4 726 66.0
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 1.9e-246 856.3 722 66.9
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 1.9e-246 856.3 744 65.5
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 7.0e-246 854.4 723 65.0
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 4.6e-245 851.7 723 65.3
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 4.6e-245 851.7 723 65.4
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 7.8e-245 850.9 713 65.6
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 1.3e-244 850.1 723 64.7
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.3e-244 850.1 739 65.0
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 1.7e-244 849.7 725 65.1
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 2.3e-244 849.4 726 66.0
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 2.3e-244 849.4 709 66.1
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 5.1e-244 848.2 725 64.7
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 8.6e-244 847.4 722 65.7
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 8.6e-244 847.4 702 67.1
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 1.5e-243 846.7 721 67.0
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 4.3e-243 845.1 739 64.5
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 5.6e-243 844.7 705 65.8
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 5.6e-243 844.7 723 65.3
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 7.3e-243 844.3 723 64.3
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 7.3e-243 844.3 728 65.8
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 9.5e-243 844.0 723 65.4
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 2.1e-242 842.8 721 65.7
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 1.8e-241 839.7 723 64.9
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 3.1e-241 839.0 711 66.2
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 4.0e-241 838.6 723 64.7
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 5.2e-241 838.2 703 65.9
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 8.9e-241 837.4 766 62.5
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 7.5e-240 834.3 702 65.4
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 1.7e-239 833.2 710 65.4
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 5.4e-238 828.2 726 64.0
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 2.7e-237 825.9 712 65.6
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 3.5e-237 825.5 732 62.8
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 1.9e-235 819.7 696 65.1
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 9.5e-235 817.4 756 61.9
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 9.5e-235 817.4 668 67.4
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 2.1e-234 816.2 698 65.2
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 8.4e-231 804.3 709 63.9
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 1.6e-229 800.0 743 62.6
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 1.1e-217 760.8 716 60.5
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.8e-204 716.8 507 74.2
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 3.0e-204 716.1 717 59.3
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 1.5e-203 713.8 766 56.8
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 2.4e-201 706.4 726 56.3
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 1.0e-196 691.0 702 58.5
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 1.4e-193 680.6 712 57.7
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 4.5e-192 675.6 716 57.5
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 3.6e-181 639.4 728 52.9
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 2.2e-178 630.2 695 54.2
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 1.5e-174 617.5 416 79.3
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 1.7e-162 577.4 664 53.8
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 3.8e-159 566.2 535 62.1
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 3.6e-157 559.7 372 78.5
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 3.5e-128 463.4 718 42.8
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 2.3e-124 450.7 303 77.2
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 1.2e-120 438.3 403 61.5
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 2.4e-116 424.1 582 46.9
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 4.9e-114 416.4 437 56.3
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 3.9e-111 406.8 591 45.0
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 3.9e-111 406.8 591 45.0
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.9e-110 404.4 496 48.2
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.8e-108 397.9 585 44.4
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 2.6e-99 367.5 352 59.1
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 1.0e-90 339.0 247 74.9
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 9.6e-86 322.4 283 67.1
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 5.3e-84 316.6 533 40.3
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 9.3e-81 305.8 274 59.9
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 2.5e-78 297.7 193 81.3
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 2.9e-74 284.3 357 49.6
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 3.1e-68 264.2 308 48.7
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.5e-57 228.8 543 35.9
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 1.0e-55 222.6 189 68.3
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 2.2e-53 214.9 617 31.0
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 2.0e-51 208.4 435 36.8
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 7.0e-44 183.3 573 33.7
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 4.9e-37 160.6 108 71.3
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 5.0e-34 150.6 127 63.8
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 2.1e-32 145.2 223 43.9
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 1.8e-31 142.1 174 47.1
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 1.5e-30 139.0 76 94.7
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 2.0e-30 138.7 96 69.8
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 7.5e-30 136.7 72 94.4
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 7.5e-30 136.7 96 68.8
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-21 109.0 342 29.5
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 2.7e-19 101.7 51 94.1
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 3.5e-19 101.3 50 100.0
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 5.0e-18 97.4 158 37.3
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 3.4e-14 84.7 53 75.5
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 4.4e-14 84.3 49 79.6
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 2.2e-13 82.0 300 29.0
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 1.4e-12 79.3 235 31.1
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 1.9e-12 79.0 42 85.7
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 5.4e-12 77.4 84 54.8
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 1.6e-11 75.9 85 51.8
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 2.7e-11 75.1 44 77.3
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 3.4e-06 58.2 43 62.8


User provided reference genes

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