Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4138 Erigeron canadensis HOM05D000078 ORTHO05D000025 4.4e-55 217.6 104 100.0
ECA238G2264 Erigeron canadensis HOM05D000078 ORTHO05D000025 2.0e-15 85.9 144 41.0
HanXRQChr02g0053171 Helianthus annuus HOM05D000078 ORTHO05D000025 5.9e-15 84.3 131 42.7
Lsat_1_v5_gn_2_130801 Lactuca sativa HOM05D000078 ORTHO05D000025 5.9e-15 84.3 155 39.4
Lsat_1_v5_gn_2_133380 Lactuca sativa HOM05D000078 ORTHO05D000025 1.6e-12 76.3 154 39.0
Lsat_1_v5_gn_2_130880 Lactuca sativa HOM05D000078 ORTHO05D000025 6.1e-12 74.3 154 38.3
MELO3C014053.2 Cucumis melo HOM05D000078 ORTHO05D000025 1.8e-08 62.8 53 56.6
CsaV3_3G003710 Cucumis sativus L. HOM05D000078 ORTHO05D000025 2.4e-08 62.4 53 56.6
Lsat_1_v5_gn_2_109761 Lactuca sativa HOM05D000078 ORTHO05D000025 2.4e-08 62.4 149 35.6
HanXRQChr08g0222921 Helianthus annuus HOM05D000078 ORTHO05D000025 3.1e-08 62.0 61 57.4
HanXRQChr08g0222931 Helianthus annuus HOM05D000078 ORTHO05D000025 3.1e-08 62.0 56 58.9
Lsat_1_v5_gn_5_108800 Lactuca sativa HOM05D000078 ORTHO05D000025 4.1e-08 61.6 152 34.9
Manes.01G067300 Manihot esculenta HOM05D000078 ORTHO05D000025 4.1e-08 61.6 122 36.1
ClCG00G000870 Citrullus lanatus HOM05D000078 ORTHO05D000025 6.9e-08 60.8 53 54.7
HanXRQChr08g0221591 Helianthus annuus HOM05D000078 ORTHO05D000025 6.9e-08 60.8 56 57.1
Ca_20244_v3 Cicer arietinum L. HOM05D000078 ORTHO05D000025 1.5e-07 59.7 147 32.0
Ca_29494_v3 Cicer arietinum L. HOM05D000078 ORTHO05D000025 1.5e-07 59.7 147 32.0
Lj8C238G7 Lonicera japonica HOM05D001697 ORTHO05D000025 1.5e-07 59.7 147 32.0
Lj1P992T52 Lonicera japonica HOM05D000078 ORTHO05D000025 2.6e-07 58.9 84 42.9
CANSAT21G1158 Cannabis sativa HOM05D000078 ORTHO05D000025 3.4e-07 58.5 37 64.9
HanXRQChr08g0221611 Helianthus annuus HOM05D000078 ORTHO05D000025 3.4e-07 58.5 56 53.6
vmacro09861 Vaccinium macrocarpon HOM05D000078 ORTHO05D000025 3.4e-07 58.5 70 42.9
Lj4g0028148 Lotus japonicus HOM05D000078 ORTHO05D000025 4.5e-07 58.2 46 60.9
Aa31LG1G2040 Aethionema arabicum HOM05D000078 ORTHO05D000025 5.9e-07 57.8 94 37.2
Cfa012102 Carpinus fangiana HOM05D000078 ORTHO05D000025 5.9e-07 57.8 50 54.0
Lj2P196T13 Lonicera japonica HOM05D000078 ORTHO05D000025 5.9e-07 57.8 136 31.6
Sed0011627 Sechium edule HOM05D000078 ORTHO05D000025 5.9e-07 57.8 36 61.1
HanXRQChr14g0462031 Helianthus annuus HOM05D000078 ORTHO05D000025 7.7e-07 57.4 128 32.0
vmacro09862 Vaccinium macrocarpon HOM05D000078 ORTHO05D000025 7.7e-07 57.4 37 73.0
CiPaw.11G141300 Carya illinoinensis HOM05D000078 ORTHO05D000025 1.0e-06 57.0 87 37.9
ClCG10G003710 Citrullus lanatus HOM05D000078 ORTHO05D000025 1.0e-06 57.0 53 52.8
CiPaw.12G098500 Carya illinoinensis HOM05D000078 ORTHO05D000025 1.3e-06 56.6 52 51.9
Haze_08951 Corylus avellana HOM05D000078 ORTHO05D000025 1.3e-06 56.6 41 58.5
FAN21G2185 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.3e-06 56.6 41 58.5
FAN24G1465 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.3e-06 56.6 41 58.5
FAN05G4556 Fragaria x ananassa HOM05D000078 ORTHO05D000025 1.7e-06 56.2 47 51.1
MD01G1196300 Malus domestica HOM05D000078 ORTHO05D000025 1.7e-06 56.2 46 56.5
Rhsim09G0196000 Rhododendron simsii HOM05D000078 ORTHO05D000025 1.7e-06 56.2 38 68.4
RcHm_v2.0_Chr7g0199231 Rosa chinensis HOM05D000078 ORTHO05D000025 1.7e-06 56.2 43 55.8
A02p12020 Brassica napus HOM05D000078 ORTHO05D000025 2.2e-06 55.8 76 35.5
CSS0032541 Camellia sinensis var. sinensis HOM05D000078 ORTHO05D000025 2.2e-06 55.8 147 32.7
FvH4_5g01460 Fragaria vesca HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
FAN05G1489 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
FAN07G1265 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
FAN08G1516 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
FAN24G1925 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
FAN27G0410 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.2e-06 55.8 41 58.5
SalBow4G3165 Salvia bowleyana HOM05D000078 ORTHO05D000025 2.2e-06 55.8 144 31.9
TAR656G0003 Trochodendron aralioides HOM05D000078 ORTHO05D000025 2.2e-06 55.8 147 30.6
Atru.chr9.1541 Acer truncatum HOM05D000078 ORTHO05D000025 2.9e-06 55.5 39 59.0
CANSAT21G2214 Cannabis sativa HOM05D000078 ORTHO05D000025 2.9e-06 55.5 59 44.1
FAN18G4533 Fragaria x ananassa HOM05D000078 ORTHO05D000025 2.9e-06 55.5 62 51.6
MBI12_g25030_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D000025 2.9e-06 55.5 157 30.6
Medtr4g102670 Medicago truncatula HOM05D000078 ORTHO05D000025 2.9e-06 55.5 145 29.7
Oeu001897.1 Olea europaea HOM05D000078 ORTHO05D000025 2.9e-06 55.5 144 31.2
Prupe.5G090800 Prunus persica HOM05D000078 ORTHO05D000025 2.9e-06 55.5 37 62.2
Actinidia03102 Actinidia chinensis HOM05D000078 ORTHO05D000025 3.8e-06 55.1 41 61.0
BcaB08g35557 Brassica carinata HOM05D000078 ORTHO05D000025 3.8e-06 55.1 46 54.3
Lsat_1_v5_gn_2_130761 Lactuca sativa HOM05D000078 ORTHO05D000025 3.8e-06 55.1 126 34.9
Psat0s9g0080 Pisum sativum HOM05D000078 ORTHO05D000025 3.8e-06 55.1 148 29.1
BcaC04g20612 Brassica carinata HOM05D000078 ORTHO05D000025 5.0e-06 54.7 81 38.3
C09p41510 Brassica napus HOM05D000078 ORTHO05D000025 5.0e-06 54.7 81 38.3
BolC9t57031H Brassica oleracea HOM05D000078 ORTHO05D000025 5.0e-06 54.7 81 38.3
CSS0026885 Camellia sinensis var. sinensis HOM05D000078 ORTHO05D000025 5.0e-06 54.7 37 64.9
ClCG01G003110 Citrullus lanatus HOM05D000078 ORTHO05D000025 5.0e-06 54.7 146 30.1
FAN04G0988 Fragaria x ananassa HOM05D000078 ORTHO05D000025 5.0e-06 54.7 32 68.8
FAN13G1118 Fragaria x ananassa HOM05D000078 ORTHO05D000025 5.0e-06 54.7 32 68.8
Oeu059061.1 Olea europaea HOM05D000078 ORTHO05D000025 5.0e-06 54.7 77 36.4
Potri.003G121200 Populus trichocarpa HOM05D000078 ORTHO05D000025 5.0e-06 54.7 144 33.3
Prupe.2G289600 Prunus persica HOM05D000078 ORTHO05D000025 5.0e-06 54.7 157 30.6
GSVIVG01010631001 Vitis vinifera HOM05D000078 ORTHO05D000025 5.0e-06 54.7 68 44.1
MSTRG.8769 Avicennia marina HOM05D000078 ORTHO05D000025 6.5e-06 54.3 154 29.9
MBI04_g37685_MAGBIO Magnolia biondii HOM05D000078 ORTHO05D000025 6.5e-06 54.3 37 59.5
Solyc06g035700.1 Solanum lycopersicum HOM05D000078 ORTHO05D000025 6.5e-06 54.3 126 33.3
Actinidia02044 Actinidia chinensis HOM05D000078 ORTHO05D000025 8.5e-06 53.9 152 29.6
A10p09790 Brassica napus HOM05D000078 ORTHO05D000025 8.5e-06 53.9 81 38.3
BraA10t43061Z Brassica rapa HOM05D000078 ORTHO05D000025 8.5e-06 53.9 81 38.3
Dinv35174 Davidia involucrata HOM05D000078 ORTHO05D000025 8.5e-06 53.9 79 38.0


User provided reference genes

Program Settings