Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G4107 Erigeron canadensis HOM05D000439 ORTHO05D006172 1.1e-80 303.1 148 100.0
ECA240G1500 Erigeron canadensis HOM05D000439 ORTHO05D006172 2.8e-18 95.9 51 84.3
ECA240G1807 Erigeron canadensis HOM05D000439 ORTHO05D006172 2.8e-18 95.9 51 84.3
Rhsim02G0025300 Rhododendron simsii HOM05D000439 ORTHO05D006172 1.8e-17 93.2 82 57.3
TWI09G0034 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 2.3e-17 92.8 78 61.5
Nitab4.5_0000043g0100 Nicotiana tabacum HOM05D000439 ORTHO05D006172 4.0e-17 92.0 78 60.3
PGR004G1056 Punica granatum HOM05D000439 ORTHO05D006172 4.0e-17 92.0 78 59.0
Rhsim04G0202100 Rhododendron simsii HOM05D000439 ORTHO05D006172 4.0e-17 92.0 93 51.6
Actinidia23511 Actinidia chinensis HOM05D000439 ORTHO05D006172 5.2e-17 91.7 78 60.3
Gohir.D09G218300 Gossypium hirsutum HOM05D000439 ORTHO05D006172 5.2e-17 91.7 78 60.3
Gorai.006G239300 Gossypium raimondii HOM05D000439 ORTHO05D006172 5.2e-17 91.7 78 60.3
Lsat_1_v5_gn_7_67240 Lactuca sativa HOM05D000439 ORTHO05D006172 5.2e-17 91.7 49 85.7
CAN.G490.11 Capsicum annuum HOM05D000439 ORTHO05D006172 6.8e-17 91.3 78 57.7
Solyc09g076050.4 Solanum lycopersicum HOM05D000439 ORTHO05D006172 6.8e-17 91.3 78 57.7
Sopen09g030890 Solanum pennellii HOM05D000439 ORTHO05D006172 6.8e-17 91.3 78 57.7
QL06p002460 Quercus lobata HOM05D000439 ORTHO05D006172 8.9e-17 90.9 78 59.0
CSS0007127 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006172 1.2e-16 90.5 78 59.0
Sp7g13040 Schrenkiella parvula HOM05D000439 ORTHO05D006172 1.2e-16 90.5 78 57.7
PGSC0003DMG400030083 Solanum tuberosum HOM05D000439 ORTHO05D006172 1.2e-16 90.5 78 57.7
CANSAT78G0526 Cannabis sativa HOM05D000439 ORTHO05D006172 1.5e-16 90.1 78 59.0
Duzib212G0312 Durio zibethinus HOM05D000439 ORTHO05D006172 1.5e-16 90.1 78 57.7
Nitab4.5_0004258g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006172 1.5e-16 90.1 49 83.7
AL7G40950 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 2.0e-16 89.7 78 57.7
THA.LOC104809078 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 2.0e-16 89.7 49 83.7
CARHR221480 Cardamine hirsuta HOM05D000439 ORTHO05D006172 2.6e-16 89.4 49 81.6
AUR62033634 Chenopodium quinoa HOM05D000439 ORTHO05D006172 2.6e-16 89.4 67 64.2
ClCG06G006240 Citrullus lanatus HOM05D000439 ORTHO05D006172 2.6e-16 89.4 78 60.3
MELO3C012651.2 Cucumis melo HOM05D000439 ORTHO05D006172 2.6e-16 89.4 78 60.3
CsaV3_7G022490 Cucumis sativus L. HOM05D000439 ORTHO05D006172 2.6e-16 89.4 78 60.3
Eucgr.H03480 Eucalyptus grandis HOM05D000439 ORTHO05D006172 2.6e-16 89.4 78 59.0
Gohir.A09G215900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 2.6e-16 89.4 78 59.0
Cpa.g.sc58.106 Carica papaya HOM05D000439 ORTHO05D006172 3.4e-16 89.0 49 83.7
Dinv13996 Davidia involucrata HOM05D000439 ORTHO05D006172 3.4e-16 89.0 78 59.0
Peaxi162Scf00092g01013 Petunia axillaris HOM05D000439 ORTHO05D006172 3.4e-16 89.0 78 59.0
Sed0018003 Sechium edule HOM05D000439 ORTHO05D006172 3.4e-16 89.0 78 59.0
CiPaw.01G166100 Carya illinoinensis HOM05D000439 ORTHO05D006172 4.4e-16 88.6 49 83.7
COL.COLO4_21479 Corchorus olitorius HOM05D000439 ORTHO05D006172 4.4e-16 88.6 49 81.6
Hma1.2p1_0602F.1_g187340 Hydrangea macrophylla HOM05D000439 ORTHO05D006172 4.4e-16 88.6 78 57.7
THA.LOC104822271 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 4.4e-16 88.6 49 81.6
TWI73G0578 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 4.4e-16 88.6 78 57.7
CSS0012474 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006172 5.8e-16 88.2 78 57.7
MD16G1194000 Malus domestica HOM05D000439 ORTHO05D006172 5.8e-16 88.2 78 59.0
Thecc.04G232100 Theobroma cacao HOM05D000439 ORTHO05D006172 5.8e-16 88.2 49 81.6
AL3G36750 Arabidopsis lyrata HOM05D000439 ORTHO05D006172 7.5e-16 87.8 49 81.6
AT3G22440 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 7.5e-16 87.8 49 81.6
Carub.0003s2262 Capsella rubella HOM05D000439 ORTHO05D006172 7.5e-16 87.8 49 81.6
Duzib052G0960 Durio zibethinus HOM05D000439 ORTHO05D006172 7.5e-16 87.8 78 57.7
Thhalv10020440m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 7.5e-16 87.8 49 81.6
Potri.008G153000 Populus trichocarpa HOM05D000439 ORTHO05D006172 7.5e-16 87.8 78 57.7
Sabra08G0116600 Salix brachista HOM05D000439 ORTHO05D006172 7.5e-16 87.8 78 57.7
Hund12129 Selenicereus undatus HOM05D000439 ORTHO05D006172 7.5e-16 87.8 78 59.0
THA.LOC104803025 Tarenaya hassleriana HOM05D000439 ORTHO05D006172 7.5e-16 87.8 49 81.6
CARHR098350 Cardamine hirsuta HOM05D000439 ORTHO05D006172 9.9e-16 87.4 49 81.6
Cfa015646 Carpinus fangiana HOM05D000439 ORTHO05D006172 9.9e-16 87.4 78 57.7
Sc19g0004140 Simmondsia chinensis HOM05D000439 ORTHO05D006172 9.9e-16 87.4 78 57.7
TWI53G0069 Tripterygium wilfordii HOM05D000439 ORTHO05D006172 9.9e-16 87.4 78 56.4
AT4G14900 Arabidopsis thaliana HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 79.6
Carub.0007s2721 Capsella rubella HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 79.6
DCAR_027218 Daucus carota HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 81.6
Thhalv10024868m.g Eutrema salsugineum HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 79.6
Manes.03G178500 Manihot esculenta HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 81.6
Manes.15G029200 Manihot esculenta HOM05D000439 ORTHO05D006172 1.3e-15 87.0 49 81.6
Atru.chr4.2461 Acer truncatum HOM05D000439 ORTHO05D006172 2.2e-15 86.3 49 81.6
Aa31LG8G9010 Aethionema arabicum HOM05D000439 ORTHO05D006172 2.2e-15 86.3 49 79.6
Gohir.A02G032200 Gossypium hirsutum HOM05D000439 ORTHO05D006172 2.2e-15 86.3 49 75.5
Prupe.1G013700 Prunus persica HOM05D000439 ORTHO05D006172 2.2e-15 86.3 78 57.7
HanXRQChr06g0181431 Helianthus annuus HOM05D000439 ORTHO05D006172 2.9e-15 85.9 49 75.5
RcHm_v2.0_Chr4g0416211 Rosa chinensis HOM05D000439 ORTHO05D006172 2.9e-15 85.9 78 57.7
arahy.Tifrunner.gnm1.ann1.JR532J Arachis hypogaea HOM05D000439 ORTHO05D006172 3.7e-15 85.5 78 53.8
arahy.Tifrunner.gnm1.ann1.Y59G7X Arachis hypogaea HOM05D000439 ORTHO05D006172 3.7e-15 85.5 78 53.8
AUR62034747 Chenopodium quinoa HOM05D000439 ORTHO05D006172 3.7e-15 85.5 49 79.6
Haze_00899 Corylus avellana HOM05D000439 ORTHO05D006172 3.7e-15 85.5 78 56.4
Gohir.D02G038900 Gossypium hirsutum HOM05D000439 ORTHO05D006172 3.7e-15 85.5 49 75.5
Gorai.005G042900 Gossypium raimondii HOM05D000439 ORTHO05D006172 3.7e-15 85.5 49 75.5
Oeu031230.1 Olea europaea HOM05D000439 ORTHO05D006172 3.7e-15 85.5 68 63.2
Sp3g20210 Schrenkiella parvula HOM05D000439 ORTHO05D006172 3.7e-15 85.5 49 79.6
Ah.04g154630 Amaranthus hybridus HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 77.6
Aqoxy5G00467 Aquilegia oxysepala HOM05D000439 ORTHO05D006172 4.9e-15 85.1 48 79.2
MSTRG.24741 Avicennia marina HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
BcaC09g49175 Brassica carinata HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
A01p32650 Brassica napus HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
C01p41830 Brassica napus HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
BolC1t04137H Brassica oleracea HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
BraA01t03393Z Brassica rapa HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
Lj3C734T11 Lonicera japonica HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
Oeu050279.2 Olea europaea HOM05D000439 ORTHO05D006172 4.9e-15 85.1 68 63.2
PSO210G3898 Papaver somniferum HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
PSO832G2628 Papaver somniferum HOM05D000439 ORTHO05D006172 4.9e-15 85.1 49 79.6
BcaC05g28068 Brassica carinata HOM05D000439 ORTHO05D006172 8.3e-15 84.3 56 67.9
C05p40900 Brassica napus HOM05D000439 ORTHO05D006172 8.3e-15 84.3 56 67.9
BolC5t32832H Brassica oleracea HOM05D000439 ORTHO05D006172 8.3e-15 84.3 56 67.9
TAR365G0584 Trochodendron aralioides HOM05D000439 ORTHO05D006172 8.3e-15 84.3 48 79.2
EL10As3g23288 Beta vulgaris HOM05D000439 ORTHO05D006172 1.1e-14 84.0 49 77.6
BcaB04g20517 Brassica carinata HOM05D000439 ORTHO05D006172 1.1e-14 84.0 49 77.6
FAN22G2148 Fragaria x ananassa HOM05D000439 ORTHO05D006172 1.1e-14 84.0 78 57.7
SGA_v2.0_scaffold166G38355 Striga asiatica HOM05D000439 ORTHO05D006172 1.4e-14 83.6 49 77.6
Lsat_1_v5_gn_9_80141 Lactuca sativa HOM05D000439 ORTHO05D006172 1.9e-14 83.2 49 77.6
Sc25g0004360 Simmondsia chinensis HOM05D000439 ORTHO05D006172 1.9e-14 83.2 49 75.5
Ciclev10004753m.g Citrus clementina HOM05D000439 ORTHO05D006172 2.4e-14 82.8 49 79.6
FAN07G0650 Fragaria x ananassa HOM05D000439 ORTHO05D006172 2.4e-14 82.8 78 56.4
FAN17G2341 Fragaria x ananassa HOM05D000439 ORTHO05D006172 2.4e-14 82.8 78 56.4
TAR636G3313 Trochodendron aralioides HOM05D000439 ORTHO05D006172 2.4e-14 82.8 77 55.8
SGA_v2.0_scaffold550G52866 Striga asiatica HOM05D000439 ORTHO05D006172 4.1e-14 82.0 49 77.6
Migut.N00184 Erythranthe guttata HOM05D000439 ORTHO05D006172 5.4e-14 81.6 49 75.5
Lj5g0001183 Lotus japonicus HOM05D000439 ORTHO05D006172 9.2e-14 80.9 67 58.2
MD13G1193100 Malus domestica HOM05D000439 ORTHO05D006172 9.2e-14 80.9 78 55.1
FvH4_4g15550 Fragaria vesca HOM05D000439 ORTHO05D006172 1.2e-13 80.5 78 55.1
FAN12G2572 Fragaria x ananassa HOM05D000439 ORTHO05D006172 1.2e-13 80.5 78 55.1
Nn1g02321 Nelumbo nucifera HOM05D000439 ORTHO05D006172 1.2e-13 80.5 66 57.6
Psat6g207360 Pisum sativum HOM05D000439 ORTHO05D006172 1.6e-13 80.1 49 71.4
TPR.G5544 Trifolium pratense HOM05D000439 ORTHO05D006172 2.1e-13 79.7 49 71.4
Ca_10896_v3 Cicer arietinum L. HOM05D000439 ORTHO05D006172 2.7e-13 79.3 49 71.4
Glyma.10G248000 Glycine max HOM05D000439 ORTHO05D006172 6.0e-13 78.2 49 71.4
Phvul.007G057500 Phaseolus vulgaris HOM05D000439 ORTHO05D006172 6.0e-13 78.2 49 71.4
unitig_26.g10518 Utricularia gibba HOM05D000439 ORTHO05D006172 6.0e-13 78.2 78 50.0
VMungo0720G0964 Vigna mungo HOM05D000439 ORTHO05D006172 6.0e-13 78.2 49 71.4
Medtr1g103710 Medicago truncatula HOM05D000439 ORTHO05D006172 7.8e-13 77.8 76 56.6
Nn4g26325 Nelumbo nucifera HOM05D000439 ORTHO05D006172 1.0e-12 77.4 48 66.7
Glyma.20G146100 Glycine max HOM05D000439 ORTHO05D006172 1.3e-12 77.0 49 69.4
SHI00449 Sapria himalayana HOM05D000439 ORTHO05D006172 1.9e-11 73.2 49 65.3
HPP92_012138 Vanilla planifolia HOM05D000439 ORTHO05D006172 3.3e-11 72.4 66 53.0
Lalb_Chr21g0304711 Lupinus albus HOM05D000439 ORTHO05D006172 4.3e-11 72.0 50 68.0
MBI11_g31279_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006172 5.6e-11 71.6 68 50.0
ATR0697G242 Amborella trichopoda HOM05D000439 ORTHO05D006172 2.8e-10 69.3 68 54.4
CDE04G3570 Ceratophyllum demersum HOM05D000439 ORTHO05D006172 2.8e-10 69.3 68 50.0
CDE07G0898 Ceratophyllum demersum HOM05D000439 ORTHO05D006172 2.8e-10 69.3 68 50.0
Os03g0794900 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006172 4.4e-08 62.0 66 39.4
Zm00001eb117030 Zea mays HOM05D000439 ORTHO05D006172 1.7e-07 60.1 66 37.9
Os07g0173200 Oryza sativa ssp. japonica HOM05D000439 ORTHO05D006172 2.2e-07 59.7 66 39.4
Zm00001eb301060 Zea mays HOM05D000439 ORTHO05D006172 2.4e-06 56.2 66 37.9


User provided reference genes

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