Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 2.3e-110 402.1 190 100.0
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 2.1e-74 282.7 137 97.8
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 5.8e-45 184.9 198 55.1
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 1.5e-32 143.7 115 67.0
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 2.0e-29 133.3 209 41.6
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 1.7e-28 130.2 171 46.2
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 5.0e-28 128.6 198 38.9
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 8.4e-28 127.9 196 42.3
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.4e-27 127.1 199 38.7
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 2.5e-27 126.3 208 40.9
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 2.5e-27 126.3 201 38.8
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 3.2e-27 125.9 198 38.9
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 4.2e-27 125.6 203 41.9
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 9.3e-27 124.4 202 40.6
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 9.3e-27 124.4 198 40.4
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.6e-26 122.1 205 39.0
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 6.1e-26 121.7 166 44.6
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.0e-25 120.9 202 39.6
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 1.3e-25 120.6 179 44.1
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.8e-25 120.2 213 39.9
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.3e-25 119.8 199 39.7
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 3.9e-25 119.0 220 38.2
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 3.9e-25 119.0 143 47.6
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 5.1e-25 118.6 207 40.6
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 5.1e-25 118.6 195 39.5
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 5.1e-25 118.6 206 39.8
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.7e-25 118.2 219 38.4
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 1.1e-24 117.5 210 40.0
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 1.1e-24 117.5 205 37.6
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.1e-24 117.5 215 40.5
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.1e-24 117.5 215 40.5
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 2.5e-24 116.3 116 53.4
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 2.5e-24 116.3 208 40.9
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.3e-24 115.9 198 38.9
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 3.3e-24 115.9 142 47.2
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 4.3e-24 115.5 144 48.6
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 4.3e-24 115.5 209 37.3
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.3e-24 115.5 124 56.5
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 4.3e-24 115.5 212 38.2
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 5.7e-24 115.2 179 43.0
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.7e-24 115.2 208 38.0
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 5.7e-24 115.2 152 45.4
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 5.7e-24 115.2 143 49.7
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 1.3e-23 114.0 124 48.4
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 1.3e-23 114.0 208 40.9
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.3e-23 114.0 152 44.7
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.6e-23 113.6 120 57.5
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.6e-23 113.6 120 57.5
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 2.2e-23 113.2 215 36.7
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 2.2e-23 113.2 138 45.7
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 2.8e-23 112.8 142 45.1
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.7e-23 112.5 90 61.1
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 3.7e-23 112.5 137 47.4
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 4.8e-23 112.1 135 45.2
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 4.8e-23 112.1 190 42.1
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 6.3e-23 111.7 173 42.2
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 8.2e-23 111.3 208 37.5
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 8.2e-23 111.3 138 48.6
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 1.1e-22 110.9 124 46.8
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 1.1e-22 110.9 198 37.9
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.1e-22 110.9 97 61.9
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 1.4e-22 110.5 156 45.5
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 3.1e-22 109.4 153 45.8
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 3.1e-22 109.4 197 36.0
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.1e-22 109.4 94 59.6
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 4.1e-22 109.0 196 38.3
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.1e-22 109.0 91 56.0
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.1e-22 109.0 98 57.1
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 4.1e-22 109.0 126 50.8
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 5.3e-22 108.6 208 39.4
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 5.3e-22 108.6 135 44.4
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.9e-22 108.2 120 55.8
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 6.9e-22 108.2 190 37.9
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 6.9e-22 108.2 132 45.5
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 9.0e-22 107.8 90 58.9
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.0e-22 107.8 94 59.6
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.2e-21 107.5 189 37.0
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.5e-21 107.1 128 46.9
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 1.5e-21 107.1 226 35.0
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 1.5e-21 107.1 206 39.3
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.5e-21 107.1 207 38.6
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 2.0e-21 106.7 169 42.0
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 3.4e-21 105.9 142 43.0
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 4.5e-21 105.5 90 58.9
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 4.5e-21 105.5 137 45.3
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.5e-21 105.5 95 55.8
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.5e-21 105.5 204 36.8
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.0e-20 104.4 94 57.4
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.3e-20 104.0 129 48.1
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 1.7e-20 103.6 110 50.0
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 2.9e-20 102.8 89 56.2
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 3.8e-20 102.4 89 56.2
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 3.8e-20 102.4 90 56.7
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 3.8e-20 102.4 174 40.2
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 6.5e-20 101.7 153 39.9
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 6.5e-20 101.7 153 39.9
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 6.5e-20 101.7 129 48.1
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 6.5e-20 101.7 129 45.7
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 8.5e-20 101.3 105 48.6
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 8.5e-20 101.3 197 35.5
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.1e-19 100.9 140 47.9
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.4e-19 100.5 90 53.3
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.9e-19 100.1 132 45.5
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 1.9e-19 100.1 136 46.3
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 3.2e-19 99.4 90 54.4
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 7.2e-19 98.2 90 54.4
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 9.4e-19 97.8 201 36.3
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.2e-18 97.4 205 34.6
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 2.1e-18 96.7 140 44.3
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 2.1e-18 96.7 121 47.1
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.1e-18 96.7 216 33.3
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.1e-18 96.7 216 33.3
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 3.6e-18 95.9 138 42.8
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 3.6e-18 95.9 129 43.4
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 4.6e-18 95.5 123 46.3
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.8e-17 93.6 120 45.8
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.8e-17 93.6 174 36.2
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.3e-17 93.2 132 43.9
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 3.0e-17 92.8 135 43.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 5.1e-17 92.0 93 52.7
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 5.1e-17 92.0 93 52.7
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 5.1e-17 92.0 131 45.0
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 6.7e-17 91.7 93 51.6
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 6.7e-17 91.7 93 51.6
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.1e-16 90.9 186 33.3
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.5e-16 90.5 206 34.5
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 4.3e-16 89.0 127 44.9
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 9.7e-16 87.8 125 42.4
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 1.3e-15 87.4 124 43.5
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 1.3e-15 87.4 105 45.7
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 1.1e-14 84.3 124 39.5
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 1.1e-14 84.3 90 47.8
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 1.4e-14 84.0 122 45.1
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 1.2e-13 80.9 185 32.4
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 7.7e-13 78.2 141 39.0
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 7.7e-13 78.2 90 47.8
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 7.7e-13 78.2 130 41.5
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 7.7e-13 78.2 90 47.8
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 7.7e-13 78.2 130 41.5
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 7.7e-13 78.2 121 33.9
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 1.0e-12 77.8 90 47.8
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 1.3e-12 77.4 139 37.4
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 2.2e-12 76.6 129 40.3
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 2.2e-12 76.6 129 40.3
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 2.9e-12 76.3 89 47.2
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 6.5e-12 75.1 135 39.3
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 6.5e-12 75.1 135 39.3
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 1.4e-11 73.9 142 36.6
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 1.4e-11 73.9 130 38.5
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 1.4e-11 73.9 130 38.5
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.2e-11 72.4 90 44.4
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 4.2e-11 72.4 139 34.5
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 9.4e-11 71.2 89 43.8
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.6e-10 70.5 142 35.9
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 6.1e-10 68.6 109 38.5
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 6.1e-10 68.6 42 69.0
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.0e-09 67.8 102 38.2
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 6.7e-09 65.1 75 44.0
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.2e-07 60.1 89 39.3
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 3.1e-06 56.2 90 37.8
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 4.1e-06 55.8 131 35.1
A06p41240 Brassica napus HOM05D013829 ORTHO05D015952 4.1e-06 55.8 187 29.9
BraA06t27048Z Brassica rapa HOM05D013829 ORTHO05D015952 4.1e-06 55.8 187 29.9
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 7.0e-06 55.1 111 37.8


User provided reference genes

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