Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.6e-186 656.0 331 100.0
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 6.1e-90 335.1 343 57.7
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 2.9e-52 209.9 311 45.7
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 1.8e-41 174.1 372 36.3
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 2.3e-36 157.1 381 34.9
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 1.7e-31 141.0 371 36.4
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 3.7e-31 139.8 372 32.5
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 4.9e-31 139.4 367 36.8
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 4.9e-31 139.4 334 35.6
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 1.2e-29 134.8 384 34.4
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 6.0e-29 132.5 375 34.4
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 1.3e-28 131.3 384 34.1
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.7e-28 131.0 372 33.9
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 2.5e-27 127.1 382 33.8
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 3.1e-25 120.2 355 31.8
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 3.1e-25 120.2 361 32.7
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 4.0e-25 119.8 393 32.1
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 5.2e-25 119.4 349 33.0
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 8.9e-25 118.6 346 32.1
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 3.4e-24 116.7 343 31.5
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 9.9e-24 115.2 313 36.1
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 2.9e-23 113.6 313 32.9
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 1.1e-22 111.7 392 31.1
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 2.4e-22 110.5 190 38.9
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 3.2e-22 110.2 176 42.0
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 1.6e-21 107.8 363 27.8
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 6.0e-21 105.9 379 30.1
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.7e-20 104.4 250 37.2
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 8.6e-20 102.1 208 38.5
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 2.5e-19 100.5 357 31.7
ECA240G3738 Erigeron canadensis HOM05D004351 ORTHO05D005196 4.3e-19 99.8 195 36.9
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 5.6e-19 99.4 363 31.1
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 7.3e-19 99.0 375 28.8
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 7.3e-19 99.0 217 37.3
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 1.6e-18 97.8 346 28.6
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 2.1e-18 97.4 364 29.7
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 2.1e-18 97.4 93 58.1
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 2.1e-18 97.4 357 30.5
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 2.8e-18 97.1 381 28.9
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 8.1e-18 95.5 396 28.5
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 1.1e-17 95.1 189 39.7
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 3.1e-17 93.6 298 31.5
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 5.2e-17 92.8 187 38.0
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 6.9e-17 92.4 370 28.4
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 8.9e-17 92.0 217 35.9
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 1.2e-16 91.7 184 37.0
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 1.5e-16 91.3 187 39.0
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 2.0e-16 90.9 320 28.8
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 4.4e-16 89.7 279 33.3
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 7.6e-16 89.0 174 37.9
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 7.6e-16 89.0 174 38.5
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 9.9e-16 88.6 168 39.3
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 9.9e-16 88.6 323 30.7
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 1.7e-15 87.8 382 31.2
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 4.9e-15 86.3 172 38.4
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 6.4e-15 85.9 340 30.3
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 8.4e-15 85.5 98 51.0
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 1.1e-14 85.1 351 29.9
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.1e-14 85.1 378 30.2
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 2.4e-14 84.0 187 36.9
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 3.2e-14 83.6 163 38.0
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 3.2e-14 83.6 346 26.6
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 9.3e-14 82.0 332 29.5
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 2.7e-13 80.5 331 26.6
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 3.5e-13 80.1 368 28.3
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 3.5e-13 80.1 380 29.2
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 4.6e-13 79.7 337 27.9
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 7.8e-13 79.0 363 25.9
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 1.7e-12 77.8 375 27.5
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 5.1e-12 76.3 294 31.6
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 6.6e-12 75.9 405 25.9
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 6.6e-12 75.9 133 39.8
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 1.1e-11 75.1 182 32.4
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 1.9e-11 74.3 79 48.1
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 4.3e-11 73.2 152 36.2
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 7.3e-11 72.4 359 28.4
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 1.3e-10 71.6 166 33.7
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 1.6e-10 71.2 343 28.6
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 4.8e-10 69.7 132 36.4
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 8.1e-10 68.9 138 34.8
unitig_37.g12810 Utricularia gibba HOM05D001841 ORTHO05D001767 1.5e-08 64.7 177 33.9
Peaxi162Scf00684g00566 Petunia axillaris HOM05D001841 ORTHO05D001767 2.6e-08 63.9 181 30.4
SEGI_26394 Sequoiadendron giganteum HOM05D001841 ORTHO05D001767 4.9e-07 59.7 197 31.5
Oeu007260.1 Olea europaea HOM05D001841 ORTHO05D001767 5.4e-06 56.2 180 30.6
Cc02_g18570 Coffea canephora HOM05D001841 ORTHO05D001767 9.3e-06 55.5 221 28.1
Oeu013688.1 Olea europaea HOM05D001841 ORTHO05D001767 9.3e-06 55.5 117 33.3


User provided reference genes

Program Settings