Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3711 Erigeron canadensis HOM05D006281 ORTHO05D005138 3.1e-121 438.7 261 100.0
HanXRQChr07g0202561 Helianthus annuus HOM05D006281 ORTHO05D005138 9.5e-38 161.4 269 49.8
Lsat_1_v5_gn_2_121281 Lactuca sativa HOM05D006281 ORTHO05D005138 2.3e-36 156.8 276 50.7
FAN06G1003 Fragaria x ananassa HOM05D006281 ORTHO05D005138 1.1e-12 78.2 269 28.6
arahy.Tifrunner.gnm1.ann1.WVY9VA Arachis hypogaea HOM05D006281 ORTHO05D005138 1.8e-12 77.4 274 28.8
FvH4_7g24210 Fragaria vesca HOM05D006281 ORTHO05D005138 1.8e-12 77.4 287 29.3
arahy.Tifrunner.gnm1.ann1.Y6I58B Arachis hypogaea HOM05D006281 ORTHO05D005138 5.2e-12 75.9 274 28.5
FAN10G2794 Fragaria x ananassa HOM05D006949 ORTHO05D008621 5.2e-12 75.9 286 29.7
Medtr1g081780 Medicago truncatula HOM05D006281 ORTHO05D005138 5.2e-12 75.9 67 53.7
Sopen06g008590 Solanum pennellii HOM05D006281 ORTHO05D005138 6.8e-12 75.5 81 50.6
Nitab4.5_0000802g0120 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.2e-11 74.7 120 39.2
MD17G1067400 Malus domestica HOM05D006281 ORTHO05D005138 1.5e-11 74.3 75 50.7
Solyc06g030540.4 Solanum lycopersicum HOM05D006281 ORTHO05D005138 2.6e-11 73.6 78 51.3
Sc07g0006300 Simmondsia chinensis HOM05D006281 ORTHO05D005138 3.4e-11 73.2 67 55.2
Aqoxy3G02946 Aquilegia oxysepala HOM05D006281 ORTHO05D005138 9.9e-11 71.6 69 50.7
FAN01G2469 Fragaria x ananassa HOM05D006281 ORTHO05D005138 1.3e-10 71.2 293 28.3
Thecc.10G022800 Theobroma cacao HOM05D006281 ORTHO05D005138 1.7e-10 70.9 77 54.5
CAN.G372.4 Capsicum annuum HOM05D006281 ORTHO05D005138 3.8e-10 69.7 76 52.6
Nitab4.5_0000802g0100 Nicotiana tabacum HOM05D006281 ORTHO05D005138 3.8e-10 69.7 107 42.1
Peaxi162Scf01313g00024 Petunia axillaris HOM05D006281 ORTHO05D005138 3.8e-10 69.7 77 50.6
Sed0005546 Sechium edule HOM05D006281 ORTHO05D005138 3.8e-10 69.7 270 28.5
FAN03G1065 Fragaria x ananassa HOM05D006281 ORTHO05D005138 8.4e-10 68.6 265 27.9
Nitab4.5_0005628g0030 Nicotiana tabacum HOM05D006281 ORTHO05D005138 8.4e-10 68.6 104 41.3
Glyma.10G159300 Glycine max HOM05D006281 ORTHO05D005138 1.1e-09 68.2 71 47.9
Ciclev10033546m.g Citrus clementina HOM05D006281 ORTHO05D005138 2.4e-09 67.0 276 26.4
Cc02_g06750 Coffea canephora HOM05D006281 ORTHO05D005138 4.1e-09 66.2 112 42.0
Glyma.20G229400 Glycine max HOM05D006281 ORTHO05D005138 7.1e-09 65.5 107 39.3
QL11p005716 Quercus lobata HOM05D021521 ORTHO05D005138 9.2e-09 65.1 93 38.7
Oeu025174.1 Olea europaea HOM05D006281 ORTHO05D005138 1.6e-08 64.3 110 41.8
Medtr1g111690 Medicago truncatula HOM05D006281 ORTHO05D005138 2.1e-08 63.9 105 41.0
QL05p072246 Quercus lobata HOM05D021521 ORTHO05D005138 2.1e-08 63.9 91 38.5
Nitab4.5_0005628g0040 Nicotiana tabacum HOM05D006281 ORTHO05D005138 2.7e-08 63.5 99 38.4
RcHm_v2.0_Chr6g0274431 Rosa chinensis HOM05D006281 ORTHO05D005138 2.7e-08 63.5 201 30.8
vmacro06983 Vaccinium macrocarpon HOM05D006281 ORTHO05D005138 4.6e-08 62.8 71 47.9
CANSAT56G0859 Cannabis sativa HOM05D006281 ORTHO05D005138 7.8e-08 62.0 72 48.6
Ca_10064_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 1.0e-07 61.6 72 47.2
COL.COLO4_25627 Corchorus olitorius HOM05D006949 ORTHO05D008621 1.0e-07 61.6 61 54.1
SalBow3G2112 Salvia bowleyana HOM05D006281 ORTHO05D005138 1.3e-07 61.2 132 37.1
ClCG11G006260 Citrullus lanatus HOM05D006281 ORTHO05D005138 1.7e-07 60.8 269 28.3
MD01G1149600 Malus domestica HOM05D006281 ORTHO05D005138 2.3e-07 60.5 68 47.1
PGR142G2970 Punica granatum HOM05D006281 ORTHO05D005138 2.3e-07 60.5 67 50.7
Actinidia33937 Actinidia chinensis HOM05D006281 ORTHO05D005138 3.0e-07 60.1 90 44.4
CANSAT56G1147 Cannabis sativa HOM05D006281 ORTHO05D005138 3.0e-07 60.1 72 47.2
Haze_18961 Corylus avellana HOM05D006281 ORTHO05D005138 3.0e-07 60.1 269 27.5
arahy.Tifrunner.gnm1.ann1.0XLH38 Arachis hypogaea HOM05D006281 ORTHO05D005138 5.1e-07 59.3 119 39.5
Migut.F00696 Erythranthe guttata HOM05D006281 ORTHO05D005138 6.6e-07 58.9 259 29.7
Manes.10G014600 Manihot esculenta HOM05D006281 ORTHO05D005138 6.6e-07 58.9 265 26.4
Prupe.2G247900 Prunus persica HOM05D006281 ORTHO05D005138 6.6e-07 58.9 75 50.7
Actinidia29689 Actinidia chinensis HOM05D006949 ORTHO05D008621 8.6e-07 58.5 131 34.4
Haze_17206 Corylus avellana HOM05D006281 ORTHO05D005138 8.6e-07 58.5 101 42.6
LjContig00357g0022557 Lotus japonicus HOM05D006281 ORTHO05D005138 8.6e-07 58.5 74 43.2
Nitab4.5_0005628g0020 Nicotiana tabacum HOM05D006281 ORTHO05D005138 8.6e-07 58.5 101 41.6
VMungo0720G2983 Vigna mungo HOM05D006281 ORTHO05D005138 8.6e-07 58.5 70 45.7
CsaV3_6G001730 Cucumis sativus L. HOM05D006281 ORTHO05D005138 1.1e-06 58.2 68 48.5
Dinv34408 Davidia involucrata HOM05D006281 ORTHO05D005138 1.1e-06 58.2 314 25.5
arahy.Tifrunner.gnm1.ann1.ZTR0B0 Arachis hypogaea HOM05D006281 ORTHO05D005138 1.5e-06 57.8 119 39.5
Lalb_Chr02g0148591 Lupinus albus HOM05D006281 ORTHO05D005138 1.5e-06 57.8 109 36.7
TWI53G0395 Tripterygium wilfordii HOM05D006281 ORTHO05D005138 1.5e-06 57.8 131 35.1
Medtr6g033440 Medicago truncatula HOM05D006281 ORTHO05D005138 1.9e-06 57.4 68 50.0
THA.LOC104824311 Tarenaya hassleriana HOM05D006281 ORTHO05D005138 2.5e-06 57.0 129 33.3
AT2G40020 Arabidopsis thaliana HOM05D010943 ORTHO05D005138 3.3e-06 56.6 98 38.8
Peaxi162Scf01313g00025 Petunia axillaris HOM05D006281 ORTHO05D005138 3.3e-06 56.6 287 30.0
QL08p063014 Quercus lobata HOM05D006281 ORTHO05D005138 3.3e-06 56.6 78 42.3
Lj5g0025792 Lotus japonicus HOM05D006281 ORTHO05D005138 4.3e-06 56.2 63 47.6
Cfa001348 Carpinus fangiana HOM05D006281 ORTHO05D005138 5.6e-06 55.8 274 26.6
Lalb_Chr10g0105101 Lupinus albus HOM05D006281 ORTHO05D005138 5.6e-06 55.8 127 34.6
TPR.G2715 Trifolium pratense HOM05D006281 ORTHO05D005138 5.6e-06 55.8 87 40.2
TPR.G19854 Trifolium pratense HOM05D006281 ORTHO05D005138 7.3e-06 55.5 74 41.9
Gohir.A10G234000 Gossypium hirsutum HOM05D006281 ORTHO05D005138 9.6e-06 55.1 265 26.8
Medtr5g082250 Medicago truncatula HOM05D006281 ORTHO05D005138 9.6e-06 55.1 267 27.7


User provided reference genes

Program Settings