Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1728.0 861 100.0
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1366.3 874 79.5
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1328.5 832 79.0
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1135.2 864 67.8
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1113.2 868 65.9
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1108.2 882 64.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1102.8 894 66.1
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1100.1 873 65.1
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1100.1 879 65.5
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1099.3 867 64.2
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1099.3 879 64.3
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1096.6 879 64.2
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 867 66.6
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 869 66.5
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1093.2 827 66.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1092.4 876 64.2
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 885 64.3
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 879 64.4
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1091.3 820 66.6
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1091.3 881 63.2
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1088.6 877 64.8
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 821 65.9
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1087.0 868 64.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1085.5 822 65.9
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1084.3 825 65.7
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1083.6 877 65.0
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1082.4 819 66.3
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1078.5 866 64.1
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1078.2 748 71.9
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1076.2 826 66.8
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 5.9e-312 1074.3 850 64.9
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.8e-311 1072.4 878 64.0
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 7.1e-311 1070.5 877 64.2
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 3.4e-310 1068.1 823 64.3
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 1.1e-308 1063.1 874 62.2
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.4e-308 1062.8 858 64.6
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 5.4e-308 1060.8 959 60.0
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 7.1e-308 1060.4 882 62.4
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 2.3e-306 1055.4 879 61.1
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 1.1e-305 1053.1 879 62.2
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 1.1e-303 1046.6 928 59.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 4.0e-303 1044.6 809 67.1
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.3e-301 1039.6 831 62.6
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 2.5e-300 1035.4 893 59.6
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.6e-299 1032.7 860 60.2
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 4.6e-299 1031.2 825 64.5
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 1.8e-298 1029.2 814 62.0
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 6.7e-298 1027.3 925 57.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 3.3e-297 1025.0 887 59.4
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 4.3e-297 1024.6 828 63.4
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 9.6e-297 1023.5 886 62.6
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 2.1e-296 1022.3 817 62.1
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 3.7e-296 1021.5 848 62.3
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 1.1e-295 1020.0 866 59.7
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 1.2e-294 1016.5 874 59.5
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 1.2e-294 1016.5 874 59.5
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 3.4e-294 1015.0 907 60.7
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 2.2e-293 1012.3 817 62.4
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 3.8e-293 1011.5 862 59.0
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 3.8e-293 1011.5 839 61.1
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 3.8e-293 1011.5 882 58.5
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 4.9e-293 1011.1 811 63.4
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 6.5e-293 1010.7 873 58.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 2.1e-291 1005.7 870 61.0
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 2.1e-291 1005.7 881 58.5
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 4.6e-291 1004.6 817 60.8
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 1.0e-290 1003.4 865 60.5
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.3e-290 1003.0 879 60.1
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 6.7e-290 1000.7 824 60.9
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 8.7e-290 1000.3 827 62.0
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.1e-289 1000.0 867 58.8
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 7.4e-289 997.3 821 60.8
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 6.3e-288 994.2 809 61.3
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.8e-287 992.6 832 62.5
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 3.1e-287 991.9 823 59.9
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 5.3e-287 991.1 823 59.9
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 5.3e-287 991.1 835 62.2
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 6.9e-287 990.7 836 62.4
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.4e-284 983.0 852 59.3
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 6.1e-283 977.6 861 59.5
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.5e-281 972.2 817 59.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 2.4e-279 965.7 870 59.4
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.2e-278 963.4 666 72.4
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 3.0e-274 948.7 757 65.4
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.4e-271 939.9 864 56.0
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.2e-268 927.5 740 62.2
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.6e-267 926.4 880 55.9
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 6.7e-266 921.0 642 70.1
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 8.8e-266 920.6 794 56.5
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 5.5e-260 901.4 848 54.2
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 2.0e-257 892.9 708 63.1
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 7.2e-252 874.4 892 54.8
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.7e-251 871.7 717 63.3
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 8.0e-251 870.9 786 59.8
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 2.3e-242 842.8 703 61.7
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 6.8e-242 841.3 734 60.5
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 5.2e-234 815.1 861 49.5
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.1e-231 807.4 876 47.5
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 3.3e-228 795.8 840 49.4
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 5.1e-213 745.3 752 49.7
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.1e-191 671.8 731 50.9
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 1.2e-185 654.4 563 53.1
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 3.8e-184 649.4 513 65.7
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 5.1e-165 585.9 480 62.7
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 5.9e-153 545.8 813 40.2
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 5.3e-146 522.7 799 38.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 4.4e-140 503.1 610 48.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.7e-115 420.2 401 54.1
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 3.4e-108 397.1 304 67.1
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 3.3e-103 380.6 396 52.5
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.0e-100 371.3 303 63.7
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.1e-88 330.1 245 65.7
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 5.6e-87 326.6 192 78.6
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 7.3e-87 326.2 188 79.8
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 4.8e-86 323.6 186 80.1
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.2e-84 318.9 246 63.0
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.5e-71 275.4 217 62.2
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.3e-70 272.3 383 38.9
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 1.3e-59 235.7 201 54.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.8e-37 162.2 147 51.0
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 4.7e-33 147.5 136 46.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 7.0e-29 133.7 171 45.0
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.1e-21 109.8 192 34.4
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.1e-13 83.2 91 52.7
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.1e-13 83.2 108 42.6
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 5.4e-13 80.9 185 30.8
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.5e-10 72.8 53 71.7
CDE06G1518 Ceratophyllum demersum HOM05D004195 ORTHO05D005309 7.5e-07 60.5 226 24.3


User provided reference genes

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