Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 1.2e-152 543.1 280 100.0
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 8.7e-106 387.5 282 75.5
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.2e-91 340.5 286 70.6
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 8.5e-77 291.2 292 60.3
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 3.6e-75 285.8 296 58.4
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 4.7e-75 285.4 290 59.3
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 6.1e-75 285.0 297 57.6
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.3e-72 277.3 295 58.3
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 2.2e-72 276.6 303 55.1
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 3.7e-72 275.8 291 53.6
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 3.7e-72 275.8 287 54.7
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 3.7e-72 275.8 287 54.7
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 4.8e-72 275.4 295 53.6
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.4e-71 273.9 287 54.7
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 2.4e-71 273.1 288 58.0
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 3.1e-71 272.7 293 55.3
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 7.0e-71 271.6 293 56.0
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 3.5e-70 269.2 290 56.2
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 3.5e-70 269.2 294 56.8
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 7.7e-70 268.1 283 54.8
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.0e-69 267.7 290 55.9
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 1.3e-69 267.3 286 54.5
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.7e-69 266.9 291 55.7
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.7e-69 266.9 294 55.1
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 1.7e-69 266.9 290 56.2
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 1.7e-69 266.9 288 55.9
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 2.2e-69 266.5 286 55.9
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 5.0e-69 265.4 286 56.6
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 5.0e-69 265.4 295 54.9
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 6.5e-69 265.0 299 54.5
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 1.1e-68 264.2 294 54.8
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 2.5e-68 263.1 288 54.9
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 4.2e-68 262.3 290 55.2
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 5.5e-68 261.9 288 55.6
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 5.5e-68 261.9 330 49.4
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 9.4e-68 261.2 287 54.0
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 1.2e-67 260.8 287 55.1
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 1.6e-67 260.4 286 54.9
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 1.6e-67 260.4 286 54.5
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 2.7e-67 259.6 294 54.1
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 2.7e-67 259.6 291 54.6
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 2.7e-67 259.6 237 62.0
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 4.7e-67 258.8 285 54.4
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 8.0e-67 258.1 307 53.1
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 8.0e-67 258.1 289 55.4
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 8.0e-67 258.1 282 54.3
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.0e-66 257.7 328 50.3
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.4e-66 257.3 297 54.5
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.8e-66 256.9 294 53.7
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.8e-66 256.9 294 53.7
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 1.8e-66 256.9 289 55.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.3e-66 256.5 292 53.8
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 5.2e-66 255.4 293 54.9
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 5.2e-66 255.4 287 54.0
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 1.2e-65 254.2 290 53.1
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 1.2e-65 254.2 289 53.6
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 2.0e-65 253.4 286 54.9
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 2.0e-65 253.4 287 53.7
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 3.4e-65 252.7 294 53.7
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 4.4e-65 252.3 293 53.9
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 5.7e-65 251.9 292 52.4
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 9.8e-65 251.1 283 54.1
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 9.8e-65 251.1 285 54.0
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 1.3e-64 250.8 287 54.4
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.3e-64 250.8 285 54.0
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 1.3e-64 250.8 290 53.1
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 1.7e-64 250.4 287 52.6
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 6.3e-64 248.4 293 54.3
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 1.1e-63 247.7 291 54.0
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 4.1e-63 245.7 292 52.4
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 5.4e-63 245.4 284 54.9
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.6e-62 243.8 293 53.2
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 2.7e-62 243.0 243 57.6
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 3.8e-61 239.2 280 49.6
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 3.8e-61 239.2 289 51.6
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 5.0e-61 238.8 281 52.0
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 5.0e-61 238.8 246 56.5
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 6.5e-61 238.4 278 50.4
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 6.5e-61 238.4 362 45.3
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 8.5e-61 238.0 290 51.0
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 2.5e-60 236.5 295 50.5
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 3.2e-60 236.1 290 51.4
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 4.2e-60 235.7 281 53.4
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 9.4e-60 234.6 295 50.8
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.2e-59 234.2 257 54.1
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 1.6e-59 233.8 285 48.4
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 1.6e-59 233.8 287 49.5
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 2.1e-59 233.4 286 48.3
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 6.1e-59 231.9 281 48.8
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.0e-58 231.1 290 50.3
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 1.0e-58 231.1 282 47.5
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 1.8e-58 230.3 281 47.7
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 1.8e-58 230.3 358 44.7
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.3e-58 229.9 257 53.3
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 5.2e-58 228.8 282 47.5
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 6.8e-58 228.4 286 46.9
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.2e-57 227.6 283 47.3
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.0e-57 226.9 280 50.4
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 5.7e-57 225.3 278 48.2
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 7.5e-57 224.9 287 46.7
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 1.3e-56 224.2 278 48.6
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 4.9e-56 222.2 282 48.2
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 6.3e-56 221.9 287 47.4
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 6.3e-56 221.9 242 50.8
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 8.3e-56 221.5 276 50.4
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 8.3e-56 221.5 287 46.3
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 1.1e-55 221.1 280 47.9
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 1.1e-55 221.1 280 47.9
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 1.1e-55 221.1 280 47.9
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 5.9e-54 215.3 292 47.6
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 7.7e-54 214.9 292 47.6
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 1.3e-53 214.2 282 47.5
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 1.3e-53 214.2 283 46.6
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.5e-52 209.9 282 46.5
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 5.2e-50 202.2 278 50.0
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 9.2e-47 191.4 312 42.3
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 4.6e-46 189.1 178 62.4
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.9e-44 183.7 477 33.8
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 2.1e-43 180.3 185 57.8
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 2.8e-43 179.9 280 42.9
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 3.6e-43 179.5 280 42.5
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 3.6e-43 179.5 240 45.4
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 3.4e-41 172.9 282 43.3
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 7.5e-41 171.8 508 31.7
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 1.4e-39 167.5 272 41.5
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 1.3e-37 161.0 176 53.4
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 1.7e-37 160.6 222 48.2
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 1.2e-35 154.5 284 40.1
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 3.1e-34 149.8 279 42.7
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 2.6e-33 146.7 177 52.0
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 4.9e-32 142.5 175 49.7
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 4.9e-32 142.5 280 36.8
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.4e-31 141.0 176 49.4
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.0e-29 134.8 129 60.5
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 1.5e-28 131.0 230 40.4
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 6.2e-27 125.6 275 34.2
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 2.6e-25 120.2 168 45.2
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 2.4e-23 113.6 91 65.9
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 1.1e-20 104.8 114 53.5
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 1.6e-19 100.9 110 55.5
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 3.4e-17 93.2 147 38.1
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 5.8e-17 92.4 275 31.3
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 2.4e-15 87.0 229 32.3
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 7.8e-14 82.0 170 32.9
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.3e-13 80.5 157 33.1
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.9e-13 79.7 166 34.3
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 6.6e-13 79.0 157 34.4
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 1.5e-12 77.8 166 34.9
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.6e-12 75.1 166 33.1
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 1.3e-11 74.7 159 34.0
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 4.8e-11 72.8 80 48.8
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.8e-10 70.9 172 32.0
CBR_g41289 Chara braunii HOM05D004891 ORTHO05D006368 1.2e-09 68.2 165 32.1
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.2e-09 68.2 174 29.9
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 4.4e-09 66.2 250 29.2
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 5.8e-09 65.9 151 35.8
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 5.8e-09 65.9 77 44.2
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.6e-09 65.5 158 32.9
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.3e-08 64.7 195 28.7
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 2.2e-08 63.9 109 41.3
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 3.8e-08 63.2 74 43.2
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.8e-08 63.2 83 43.4
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 6.4e-08 62.4 77 42.9
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 8.4e-08 62.0 108 38.9
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 1.4e-07 61.2 172 31.4
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.4e-07 61.2 90 41.1
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 1.9e-07 60.8 82 42.7
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 3.2e-07 60.1 93 40.9
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 3.2e-07 60.1 123 35.8
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 3.2e-07 60.1 107 35.5
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 3.2e-07 60.1 130 34.6
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 5.4e-07 59.3 114 36.8
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 5.4e-07 59.3 87 37.9
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 7.1e-07 58.9 84 47.6
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 7.1e-07 58.9 84 47.6
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 9.3e-07 58.5 74 40.5
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 9.3e-07 58.5 74 40.5
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 2.1e-06 57.4 168 33.9
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 2.1e-06 57.4 192 27.1
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 2.7e-06 57.0 220 29.1
SEGI_09179 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 3.5e-06 56.6 168 28.6
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 3.5e-06 56.6 179 30.2
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 6.0e-06 55.8 75 38.7
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 6.0e-06 55.8 191 24.6
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 7.9e-06 55.5 91 39.6
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 7.9e-06 55.5 160 30.0
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 7.9e-06 55.5 82 40.2


User provided reference genes

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