Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 3.2e-102 375.2 201 100.0
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 3.6e-77 292.0 196 81.6
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 9.1e-73 277.3 199 77.4
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 1.2e-72 276.9 191 78.0
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 2.0e-72 276.2 193 77.7
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 2.7e-72 275.8 190 78.4
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 2.7e-72 275.8 190 78.4
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 2.7e-72 275.8 199 77.4
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.5e-72 275.4 190 78.4
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 4.5e-72 275.0 190 78.4
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 4.5e-72 275.0 190 78.4
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 5.9e-72 274.6 193 77.7
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 7.7e-72 274.2 193 78.2
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 7.7e-72 274.2 194 77.8
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 1.0e-71 273.9 195 77.4
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.3e-71 273.5 190 78.4
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.3e-71 273.5 195 77.9
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 1.3e-71 273.5 190 77.4
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.7e-71 273.1 195 75.9
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 1.7e-71 273.1 191 79.1
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.7e-71 273.1 196 76.5
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.7e-71 273.1 196 76.5
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.7e-71 273.1 196 76.5
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 2.2e-71 272.7 190 77.9
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.2e-71 272.7 199 75.9
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 2.9e-71 272.3 195 75.9
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 2.9e-71 272.3 195 78.5
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 2.9e-71 272.3 195 76.4
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 5.0e-71 271.6 190 78.9
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 5.0e-71 271.6 190 77.4
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 5.0e-71 271.6 190 78.9
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 5.0e-71 271.6 195 76.4
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 5.0e-71 271.6 195 76.4
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 5.0e-71 271.6 190 77.4
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 6.5e-71 271.2 193 76.2
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 8.5e-71 270.8 190 77.4
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.1e-70 270.4 195 75.9
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.1e-70 270.4 190 77.4
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.1e-70 270.4 187 78.6
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 1.1e-70 270.4 195 76.9
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.5e-70 270.0 190 77.9
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.5e-70 270.0 184 80.4
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.5e-70 270.0 195 75.9
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 1.5e-70 270.0 195 77.9
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 1.5e-70 270.0 195 77.9
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.9e-70 269.6 190 77.9
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 1.9e-70 269.6 195 76.9
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.9e-70 269.6 195 75.9
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 2.5e-70 269.2 195 77.9
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 3.2e-70 268.9 191 77.5
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 3.2e-70 268.9 190 75.8
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 4.2e-70 268.5 190 78.4
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 5.5e-70 268.1 195 76.9
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 7.2e-70 267.7 189 77.8
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 7.2e-70 267.7 195 76.9
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 1.2e-69 266.9 195 77.4
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 2.1e-69 266.2 195 76.4
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 3.6e-69 265.4 195 74.9
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 3.6e-69 265.4 193 74.1
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 4.7e-69 265.0 195 74.4
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 8.0e-69 264.2 193 74.6
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 8.0e-69 264.2 190 74.2
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 1.4e-68 263.5 195 74.9
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 1.4e-68 263.5 190 75.8
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.4e-68 263.5 195 74.9
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.4e-68 263.5 195 75.9
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 4.0e-68 261.9 201 73.6
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 4.0e-68 261.9 193 72.5
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 5.2e-68 261.5 195 74.9
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 6.8e-68 261.2 195 74.4
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 6.8e-68 261.2 195 74.4
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.8e-68 260.8 191 75.4
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 8.8e-68 260.8 185 76.8
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.2e-67 260.4 190 74.7
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.2e-67 260.4 193 72.5
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.5e-67 260.0 191 75.4
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 1.5e-67 260.0 195 73.8
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 1.5e-67 260.0 195 73.8
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 2.6e-67 259.2 195 73.3
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.3e-66 256.9 185 77.3
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 1.3e-66 256.9 186 73.7
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 2.2e-66 256.1 195 73.3
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.2e-66 256.1 191 75.4
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 3.7e-66 255.4 191 74.3
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 3.7e-66 255.4 195 71.8
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 4.8e-66 255.0 193 71.0
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 8.3e-66 254.2 195 71.8
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 1.1e-65 253.8 201 71.1
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 1.8e-65 253.1 185 74.6
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 5.4e-65 251.5 188 73.4
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 9.1e-65 250.8 179 76.0
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 4.5e-64 248.4 195 71.3
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 4.5e-64 248.4 195 71.3
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 5.9e-64 248.1 185 74.1
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 7.7e-64 247.7 186 71.5
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 2.5e-62 242.7 170 78.2
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 6.1e-61 238.0 186 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 1.0e-60 237.3 189 67.2
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 1.0e-60 237.3 196 67.9
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 4.0e-60 235.3 185 68.1
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 6.8e-60 234.6 195 67.7
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 4.4e-59 231.9 195 67.7
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 9.8e-59 230.7 185 69.7
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 9.2e-57 224.2 189 64.0
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 3.5e-56 222.2 187 65.2
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 7.8e-56 221.1 185 64.9
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 5.0e-55 218.4 197 61.4
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 1.5e-54 216.9 185 60.0
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 1.2e-51 207.2 121 87.6
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 3.7e-50 202.2 127 82.7
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 3.5e-48 195.7 122 82.0
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 1.7e-47 193.4 167 64.7
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 9.5e-46 187.6 197 56.3
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 2.6e-43 179.5 195 59.5
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.0e-40 168.3 183 57.4
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 2.8e-37 159.5 97 80.4
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 3.6e-37 159.1 133 71.4
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.1e-36 157.5 112 75.0
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.4e-35 152.5 196 49.0
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 4.4e-35 152.1 127 66.1
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 2.7e-32 142.9 170 44.7
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 8.9e-28 127.9 95 70.5
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 4.4e-27 125.6 107 65.4
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 5.8e-27 125.2 139 56.1
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 4.9e-26 122.1 106 63.2
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 1.9e-22 110.2 74 78.4
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.7e-18 97.1 169 33.7
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 3.8e-18 95.9 60 86.7
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.2e-16 90.9 66 75.8
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 2.3e-15 86.7 45 86.7
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 1.8e-12 77.0 167 31.7
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 3.8e-10 69.3 65 55.4
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 9.6e-06 54.7 53 62.3


User provided reference genes

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